RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 ZNF250P15622 560 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 NCK1P16333 377 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 ZNF26P17031 533 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 CDAP32320 146 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 LSP1P33241 339 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 SLC9A3P48764 834 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 GZMKP49863 264 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 CTXN1P60606 82 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 GALK2Q01415 458 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 RIN1Q13671 783 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 IQCCQ4KMZ1 466 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 FAM27BQ5VT28 67 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 FAM205BPQ63HN1 556 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 CYB5R2Q6BCY4 276 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 TBPL2Q6SJ96 375 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 FOXL2NBQ6ZUU3 175 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 TMPRSS11FQ6ZWK6 438 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 MBOAT2Q6ZWT7 520 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 FKBP9P1Q75LS8 142 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 OAFQ86UD1 273 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 LRP11Q86VZ4 500 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 MEX3DQ86XN8 651 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 ZNF540Q8NDQ6 660 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 RBM15BQ8NDT2 890 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 FNDC8Q8TC99 324 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 SLC7A13Q8TCU3 470 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 DHRS1Q96LJ7 313 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 TSPAN32Q96QS1 320 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 KCTD14Q9BQ13 255 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 BPESC1Q9GZL8 116 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 NMNAT1Q9HAN9 279 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 DYNLRB1Q9NP97 96 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 SPAG4Q9NPE6 437 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 ZNF346Q9UL40 294 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 TMA7Q9Y2S6 64 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 A0A1W2PRQ8 180 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 SLC22A23A1A5C7 686 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 SH3PXD2BA1X283 911 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 EFCAB9A8MZ26 197 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 LILRA1O75019 489 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 PTHP01270 115 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 SEMG1P04279 462 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 ERCC1P07992 297 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 SAGP10523 405 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 CCL2P13500 99 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 ZNF23P17027 643 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 ZNF32P17041 273 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 GPR4P46093 362 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 LIMS1P48059 325 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 CD47Q08722 323 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 TOP3AQ13472 1001 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 DGCR6Q14129 220 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 GGTLC2Q14390 218 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 CARTPTQ16568 116 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 ZBED5Q49AG3 693 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 PABPC1L2AQ5JQF8 200 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 ELFN2Q5R3F8 820 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 THEM4Q5T1C6 240 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 GKAP1Q5VSY0 366 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 RGS7BPQ6MZT1 257 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 ZNF730Q6ZMV8 503 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 FAM122BQ7Z309 247 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 IGFN1Q86VF2 1251 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 LRRC18Q8N456 261 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 FAM86B1Q8N7N1 296 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 CLDN22Q8N7P3 220 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 ARIH2OSQ8N7S6 290 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 CPEB3Q8NE35 698 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 OR13C2Q8NGS9 318 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 OR51A7Q8NH64 312 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 UBASH3BQ8TF42 649 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 FAM162AQ96A26 154 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 MSI2Q96DH6 328 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 POM121L2Q96KW2 1035 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 MDFIQ99750 246 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 SYT3Q9BQG1 590 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 FUZQ9BT04 418 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 FAM107BQ9H098 131 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 NSRP1Q9H0G5 558 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 TPK1Q9H3S4 243 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 MS4A5Q9H3V2 200 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 GORASP2Q9H8Y8 452 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 RNF121Q9H920 327 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 CDH20Q9HBT6 801 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 DCAF13Q9NV06 445 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 NDUFAF4Q9P032 175 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 REV1Q9UBZ9 1251 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 RPS6KA6Q9UK32 745 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 SIGLEC7Q9Y286 467 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 TMEM5Q9Y2B1 443 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 MXRA5Q9NR99 2828 aa7.78□□□□□ -1.16
PDLIM5-209ENST00000506632 STAB1Q9NY15 2570 aa7.77□□□□□ -1.16
PDLIM5-209ENST00000506632 LOC100509620A0A075B734 347 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 IQCMA0A1B0GVH7 501 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 A6NIZ1 184 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 A6NJY4 79 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 LMX1BO60663 402 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 PTP4A3O75365 173 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 NCR1O76036 304 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 CLPTM1O96005 669 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms