RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 IST1P53990 364 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 RAB1AP62820 205 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 TUBA1BP68363 451 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 TUBA4AP68366 448 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 ID3Q02535 119 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 COX10Q12887 443 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 SGCAQ16586 387 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 GSG1Q2KHT4 349 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 SLC36A2Q495M3 483 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 C10orf128Q5T292 105 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 C1orf146Q5VVC0 180 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 TMEM53Q6P2H8 277 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 PGBD2Q6P3X8 592 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 FDX2Q6P4F2 183 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 SEZ6L2Q6UXD5 910 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 TUBA1AQ71U36 451 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 SLC16A14Q7RTX9 510 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 REC114Q7Z4M0 266 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 MDP1Q86V88 176 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 SKA3Q8IX90 412 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 C10orf67Q8IYJ2 551 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 AQP11Q8NBQ7 271 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 PAPD5Q8NDF8 572 aaKnown RBP6.33□□□□□ -1.4
GYPB-206ENST00000506516 OR4C15Q8NGM1 316 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 ZNF519Q8TB69 540 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 FANK1Q8TC84 345 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 GIPC3Q8TF64 312 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 SMAP2Q8WU79 429 aaPredicted RBP6.33□□□□□ -1.4
GYPB-206ENST00000506516 TMEM171Q8WVE6 324 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 NSMAFQ92636 917 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 MBD6Q96DN6 1003 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 Q96M85 177 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 ERMAPQ96PL5 475 aaPredicted RBP6.33□□□□□ -1.4
GYPB-206ENST00000506516 SLC38A2Q96QD8 506 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 GPX7Q96SL4 187 aaPredicted RBP6.33□□□□□ -1.4
GYPB-206ENST00000506516 CCL19Q99731 98 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 GPA33Q99795 319 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 IFT27Q9BW83 186 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 OR52D1Q9H346 318 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 NELFAQ9H3P2 528 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 RNF121Q9H920 327 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 SEC61A2Q9H9S3 476 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 ZNF556Q9HAH1 456 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 TMEM38BQ9NVV0 291 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 BEX4Q9NWD9 120 aaPredicted RBP6.33□□□□□ -1.4
GYPB-206ENST00000506516 CRNNQ9UBG3 495 aaPredicted RBP6.33□□□□□ -1.4
GYPB-206ENST00000506516 IL20RAQ9UHF4 553 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 ADAM18Q9Y3Q7 739 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 SPEF1Q9Y4P9 236 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 IER3IP1Q9Y5U9 82 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 ATP23Q9Y6H3 246 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 TACC2O95359 2948 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 APCP25054 2843 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 TEX13CA0A0J9YWL9 993 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 SLC22A23A1A5C7 686 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 PRSS37A4D1T9 235 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 SHISA9B4DS77 424 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 SOCS2O14508 198 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 ARPC3O15145 178 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 TMPRSS2O15393 492 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 SMPD2O60906 423 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 FKBP6O75344 327 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 SEC14L2O76054 403 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 ATE1O95260 518 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 SLC2A10O95528 541 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 TXNDC12O95881 172 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 RENP00797 406 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 IGLV1-44P01699 117 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 CECR9P0C854 216 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 ZNF26P17031 533 aaPredicted RBP6.32□□□□□ -1.4
GYPB-206ENST00000506516 CD53P19397 219 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 PTDSS1P48651 473 aaKnown RBP6.32□□□□□ -1.4
GYPB-206ENST00000506516 FABP6P51161 128 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 IDH3GP51553 393 aaPredicted RBP6.32□□□□□ -1.4
GYPB-206ENST00000506516 ART1P52961 327 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 CDH11P55287 796 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 PCBD1P61457 104 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 MRPS34P82930 218 aaKnown RBP6.32□□□□□ -1.4
GYPB-206ENST00000506516 PLP2Q04941 152 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 PPP1R8Q12972 351 aaKnown RBP6.32□□□□□ -1.4
GYPB-206ENST00000506516 NPRL3Q12980 569 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 KRR1Q13601 381 aaKnown RBP6.32□□□□□ -1.4
GYPB-206ENST00000506516 DEFB113Q30KQ7 82 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 AGAP6Q5VW22 663 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 ZNF770Q6IQ21 691 aaPredicted RBP6.32□□□□□ -1.4
GYPB-206ENST00000506516 ZNF544Q6NX49 715 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 DNM1P34Q6PK57 102 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 SLC25A47Q6Q0C1 308 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 RASSF6Q6ZTQ3 369 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 ASRGL1Q7L266 308 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 FAM122BQ7Z309 247 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 ADCK1Q86TW2 530 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 JAZF1Q86VZ6 243 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 FBXL14Q8N1E6 418 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 LRRC18Q8N456 261 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 KBTBD8Q8NFY9 601 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 OR4F15Q8NGB8 312 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 OR10G2Q8NGC3 310 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 OR9Q2Q8NGE9 314 aa6.32□□□□□ -1.4
GYPB-206ENST00000506516 OR52L1Q8NGH7 329 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms