RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 DOK2O60496 412 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 CRHP06850 196 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 FAM157CP0CG43 387 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 TMEM52BQ4KMG9 183 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 ALG10BQ5I7T1 473 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 LINC01590Q5TEZ4 76 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 JAZF1Q86VZ6 243 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 FGF13Q92913 245 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 TMEM106AQ96A25 262 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 PTX4Q96A99 478 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 MRPL38Q96DV4 380 aaKnown RBP14.42□□□□□ -0.1
SCLT1-208ENST00000506368 ZC3H10Q96K80 434 aaKnown RBP14.42□□□□□ -0.1
SCLT1-208ENST00000506368 GUCD1Q96NT3 240 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 CCNL2Q96S94 520 aaPredicted RBP14.42□□□□□ -0.1
SCLT1-208ENST00000506368 ALG12Q9BV10 488 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 BCL2L14Q9BZR8 327 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 A0A1W2PS29 197 aa14.41□□□□□ -0.1
SCLT1-208ENST00000506368 SPINT1O43278 529 aa14.41□□□□□ -0.1
SCLT1-208ENST00000506368 NUDT21O43809 227 aaKnown RBP14.41□□□□□ -0.1
SCLT1-208ENST00000506368 BRINP1O60477 761 aa14.41□□□□□ -0.1
SCLT1-208ENST00000506368 ABHD16AO95870 558 aa14.41□□□□□ -0.1
SCLT1-208ENST00000506368 SDHAP31040 664 aa14.41□□□□□ -0.1
SCLT1-208ENST00000506368 TLX1P31314 330 aaPredicted RBP14.41□□□□□ -0.1
SCLT1-208ENST00000506368 RPL4P36578 427 aaKnown RBP14.41□□□□□ -0.1
SCLT1-208ENST00000506368 EIF2S3P41091 472 aaKnown RBP14.41□□□□□ -0.1
SCLT1-208ENST00000506368 SOX2P48431 317 aa14.41□□□□□ -0.1
SCLT1-208ENST00000506368 NTHL1P78549 312 aa14.41□□□□□ -0.1
SCLT1-208ENST00000506368 C2orf76Q3KRA6 126 aa14.41□□□□□ -0.1
SCLT1-208ENST00000506368 LRRC37A5PQ49AS3 106 aa14.41□□□□□ -0.1
SCLT1-208ENST00000506368 BEX5Q5H9J7 111 aa14.41□□□□□ -0.1
SCLT1-208ENST00000506368 ARHGAP40Q5TG30 622 aa14.41□□□□□ -0.1
SCLT1-208ENST00000506368 FAM166AQ6J272 317 aa14.41□□□□□ -0.1
SCLT1-208ENST00000506368 ZNF550Q7Z398 422 aa14.41□□□□□ -0.1
SCLT1-208ENST00000506368 ANGPTL5Q86XS5 388 aa14.41□□□□□ -0.1
SCLT1-208ENST00000506368 WDSUB1Q8N9V3 476 aa14.41□□□□□ -0.1
SCLT1-208ENST00000506368 BOLLQ8N9W6 283 aaKnown RBP14.41□□□□□ -0.1
SCLT1-208ENST00000506368 OR51L1Q8NGJ5 315 aa14.41□□□□□ -0.1
SCLT1-208ENST00000506368 SGK3Q96BR1 496 aa14.41□□□□□ -0.1
SCLT1-208ENST00000506368 MALSU1Q96EH3 234 aa14.41□□□□□ -0.1
SCLT1-208ENST00000506368 ADAD1Q96M93 576 aaKnown RBP14.41□□□□□ -0.1
SCLT1-208ENST00000506368 OR5B2Q96R09 309 aa14.41□□□□□ -0.1
SCLT1-208ENST00000506368 ZNF587Q96SQ5 575 aaPredicted RBP14.41□□□□□ -0.1
SCLT1-208ENST00000506368 CDX2Q99626 313 aaPredicted RBP14.41□□□□□ -0.1
SCLT1-208ENST00000506368 IGFLR1Q9H665 355 aa14.41□□□□□ -0.1
SCLT1-208ENST00000506368 SPHK2Q9NRA0 654 aa14.41□□□□□ -0.1
SCLT1-208ENST00000506368 NUP210LQ5VU65 1888 aa14.41□□□□□ -0.1
SCLT1-208ENST00000506368 PMS2P1A4D2B8 440 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 RNASEK-C17orf49H0YIS7 233 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 IGHV2-5P01817 119 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 PGAM2P15259 253 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 ZNF44P15621 663 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 ARRB1P49407 418 aaPredicted RBP14.4□□□□□ -0.1
SCLT1-208ENST00000506368 TAS2R31P59538 309 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 TMEM215Q68D42 235 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 OR10K2Q6IF99 312 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 FDX2Q6P4F2 183 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 UNQ6126/PRO20091Q6UXV3 157 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 ZNF676Q8N7Q3 588 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 ADAMTS17Q8TE56 1095 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 GRHL3Q8TE85 626 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 NMNAT3Q96T66 252 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 ATG5Q9H1Y0 275 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 OPA3Q9H6K4 179 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 CHMP1AQ9HD42 196 aaPredicted RBP14.4□□□□□ -0.1
SCLT1-208ENST00000506368 MRM2Q9UI43 246 aaKnown RBP14.4□□□□□ -0.1
SCLT1-208ENST00000506368 MTCH2Q9Y6C9 303 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 MYO10Q9HD67 2058 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 VCANP13611 3396 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 TRAV8-7A0A075B6U6 113 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 TMEM265A0A087WTH1 108 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 C9orf170A2RU37 121 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 ZNF705EA8MWA4 302 aaPredicted RBP14.4□□□□□ -0.1
SCLT1-208ENST00000506368 IDSB3KWA1 339 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 TAAR5O14804 337 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 LDB3O75112 727 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 DUS4LO95620 317 aaKnown RBP14.4□□□□□ -0.1
SCLT1-208ENST00000506368 CD5P06127 495 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 PGDP52209 483 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 ADAM8P78325 824 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 TCEAL5Q5H9L2 206 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 YOD1Q5VVQ6 348 aaPredicted RBP14.4□□□□□ -0.1
SCLT1-208ENST00000506368 TMPRSS9Q7Z410 1059 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 OR13C8Q8NGS7 320 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 OR2G2Q8NGZ5 317 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 PHOSPHO1Q8TCT1 267 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 DVL3Q92997 716 aaPredicted RBP14.4□□□□□ -0.1
SCLT1-208ENST00000506368 HIST1H2BAQ96A08 127 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 Q96M85 177 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 PAPOLGQ9BWT3 736 aaKnown RBP14.4□□□□□ -0.1
SCLT1-208ENST00000506368 CHRDQ9H2X0 955 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.4□□□□□ -0.1
SCLT1-208ENST00000506368 FLRT3Q9NZU0 649 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 KCNE5Q9UJ90 142 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 TIMM10BQ9Y5J6 103 aa14.4□□□□□ -0.1
SCLT1-208ENST00000506368 HEATR5BQ9P2D3 2071 aa14.39□□□□□ -0.11
SCLT1-208ENST00000506368 LRRK1Q38SD2 2015 aa14.39□□□□□ -0.11
SCLT1-208ENST00000506368 BRWD1Q9NSI6 2320 aa14.39□□□□□ -0.11
SCLT1-208ENST00000506368 TCF20Q9UGU0 1960 aaKnown RBP14.39□□□□□ -0.11
SCLT1-208ENST00000506368 EFCAB7A8K855 629 aa14.39□□□□□ -0.11
SCLT1-208ENST00000506368 PEX12O00623 359 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms