RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 PCBD2Q9H0N5 130 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 TLNRD1Q9H1K6 362 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 TMEM133Q9H2Q1 129 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 GCM1Q9NP62 436 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 ZCCHC3Q9NUD5 404 aaKnown RBP2.03□□□□□ -2.08
NEDD4-205ENST00000506154 HCFC1R1Q9NWW0 138 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 C2orf42Q9NWW7 574 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 RDH8Q9NYR8 311 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 CNIH4Q9P003 139 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 PAK5Q9P286 719 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 ZNF670-ZNF695F2Z2N8 137 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 WWP2O00308 870 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 NME4O00746 187 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 CASKO14936 926 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 XRCC3O43542 346 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 CYTIPO60759 359 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 RP2O75695 350 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 CA3P07451 260 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 FCGR3AP08637 254 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 TRIM49P0CI25 452 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 CD1BP29016 333 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 SOX3P41225 446 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 CRYBB2P43320 205 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 RAB7AP51149 207 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 LUMP51884 338 aaPredicted RBP2.03□□□□□ -2.08
NEDD4-205ENST00000506154 ITGA1P56199 1179 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 MAZP56270 477 aaKnown RBP2.03□□□□□ -2.08
NEDD4-205ENST00000506154 RPL15P61313 204 aaKnown RBP2.03□□□□□ -2.08
NEDD4-205ENST00000506154 FKBP3Q00688 224 aaKnown RBP2.03□□□□□ -2.08
NEDD4-205ENST00000506154 NHLH1Q02575 133 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 TANGO2Q6ICL3 276 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 REEP3Q6NUK4 255 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 DRAM2Q6UX65 266 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 SIGLEC15Q6ZMC9 328 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 CENPVQ7Z7K6 275 aaPredicted RBP2.03□□□□□ -2.08
NEDD4-205ENST00000506154 CBWD2Q8IUF1 395 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 ATPAF2Q8N5M1 289 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 ZBTB2Q8N680 514 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 OR4S1Q8NGB4 309 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 OR4D5Q8NGN0 318 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 ABHD4Q8TB40 342 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 TRMT10AQ8TBZ6 339 aaKnown RBP2.03□□□□□ -2.08
NEDD4-205ENST00000506154 OIT3Q8WWZ8 545 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 PHYHIPQ92561 330 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 TRIB3Q96RU7 358 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 RNF2Q99496 336 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 NPAS2Q99743 824 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 NICN1Q9BSH3 213 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 ISYNA1Q9NPH2 558 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 SEMA4BQ9NPR2 832 aaPredicted RBP2.03□□□□□ -2.08
NEDD4-205ENST00000506154 POLR3HQ9Y535 204 aaPredicted RBP2.03□□□□□ -2.08
NEDD4-205ENST00000506154 KCNE1BA0A087WTH5 132 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 TRAV39A0A0B4J263 110 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 SMIM28A0A1B0GU29 152 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 A0A1B0GW64 132 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 TRBC2A0A5B9 178 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 CBY3A6NI87 242 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 KDELR3O43731 214 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 LSM8O95777 96 aaKnown RBP2.03□□□□□ -2.08
NEDD4-205ENST00000506154 TXNDC12O95881 172 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 IGFBP1P08833 259 aaPredicted RBP2.03□□□□□ -2.08
NEDD4-205ENST00000506154 C1QTNF9P0C862 333 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 EN2P19622 333 aaPredicted RBP2.03□□□□□ -2.08
NEDD4-205ENST00000506154 PI3P19957 117 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 GLRA1P23415 457 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 MAGEA5P43359 124 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 COMPP49747 757 aaPredicted RBP2.03□□□□□ -2.08
NEDD4-205ENST00000506154 KHKP50053 298 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 CYP2J2P51589 502 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 OPCMLQ14982 345 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 GSG1Q2KHT4 349 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 PRSS54Q6PEW0 395 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 SLC35D2Q76EJ3 337 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 NDUFAF7Q7L592 441 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 LAS2Q8IYD9 372 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 SLC39A11Q8N1S5 342 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 BHLHE23Q8NDY6 225 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 OR4K2Q8NGD2 314 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 THAP4Q8WY91 577 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 TM9SF4Q92544 642 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 NPIPB3Q92617 1050 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 FBXO17Q96EF6 278 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 PEBP4Q96S96 227 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 EML4Q9HC35 981 aaKnown RBP2.03□□□□□ -2.08
NEDD4-205ENST00000506154 NGBQ9NPG2 151 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 SLC17A5Q9NRA2 495 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 SCN3BQ9NY72 215 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 PSORS1C1Q9UIG5 152 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 PITPNC1Q9UKF7 332 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 PACSIN3Q9UKS6 424 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 ABT1Q9ULW3 272 aaKnown RBP2.03□□□□□ -2.08
NEDD4-205ENST00000506154 OAZ3Q9UMX2 235 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 DHDHQ9UQ10 334 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 PPIAL4AQ9Y536 164 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 A0A087X1B8 175 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 A0A0G2JNJ9 132 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 EDDM13A0A1B0GTR0 161 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 PNMA8CA0A1B0GUJ8 204 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 TMEM213A2RRL7 107 aa2.03□□□□□ -2.08
NEDD4-205ENST00000506154 FAM90A20PA6NIJ5 464 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms