RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 HIST3H3Q16695 136 aa9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 ZMAT1Q5H9K5 638 aa9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 AVPI1Q5T686 147 aa9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 ARL9Q6T311 187 aa9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 RBMS3Q6XE24 437 aaKnown RBP9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 USP51Q70EK9 711 aa9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 C1QL2Q7Z5L3 287 aa9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 PTOV1Q86YD1 416 aa9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 LRRC18Q8N456 261 aa9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 DPP10Q8N608 796 aa9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 OR1J1Q8NGS3 322 aa9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 VANGL1Q8TAA9 524 aaPredicted RBP9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 FNDC8Q8TC99 324 aa9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 ST7LQ8TDW4 575 aa9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 DIRC2Q96SL1 478 aa9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 CGREF1Q99674 301 aa9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 SH3GL1Q99961 368 aa9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 GAL3ST1Q99999 423 aa9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 EBF4Q9BQW3 602 aa9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 WFDC6Q9BQY6 131 aa9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 POLR2J2Q9GZM3 115 aaKnown RBP9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 PCDHAC1Q9H158 963 aa9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 POLR2J3Q9H1A7 115 aaKnown RBP9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 IKZF5Q9H5V7 419 aa9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 SMURF2Q9HAU4 748 aa9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 NTN4Q9HB63 628 aa9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 G6PC2Q9NQR9 355 aa9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 INIPQ9NRY2 104 aa9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 CGGBP1Q9UFW8 167 aaPredicted RBP9.48□□□□□ -0.89
UBE2D3-219ENST00000505207 LOC105371242A0A075B767 164 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 HTR3EA5X5Y0 456 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 IGF2P01344 180 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 IFNA14P01570 189 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 MT-ND1P03886 318 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 OPN1SWP03999 348 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 FUT1P19526 365 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 STOMP27105 288 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 IFNA8P32881 189 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 PCGF2P35227 344 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 GDI2P50395 445 aaKnown RBP9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 ARHGDIAP52565 204 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 ARFIP2P53365 341 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 PCBD1P61457 104 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 MRPS34P82930 218 aaKnown RBP9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 NFYCQ13952 458 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 TAF11Q15544 211 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 TSTQ16762 297 aaKnown RBP9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 PABPC1L2AQ5JQF8 200 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 AGBL2Q5U5Z8 902 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 ZER1Q7Z7L7 766 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 WDFY1Q8IWB7 410 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 PAQR4Q8N4S7 273 aaPredicted RBP9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 LRRC17Q8N6Y2 441 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 SYT14Q8NB59 555 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 NOXO1Q8NFA2 376 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 GPR32P1Q8NGA4 272 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 STON2Q8WXE9 905 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 CCL17Q92583 94 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 SGTBQ96EQ0 304 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 RBP7Q96R05 134 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 ZNF347Q96SE7 839 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 ZNF426Q9BUY5 554 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 MRPL13Q9BYD1 178 aaKnown RBP9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 C7orf69Q9H7B7 122 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 DDX28Q9NUL7 540 aaKnown RBP9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 BAG5Q9UL15 447 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 ZDHHC8Q9ULC8 765 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 WIPI2Q9Y4P8 454 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 SVEP1Q4LDE5 3571 aa9.47□□□□□ -0.89
UBE2D3-219ENST00000505207 NPIPB13A6NJU9 1138 aa9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 NPIPB4C9JG80 1138 aa9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 H3BSA7 217 aa9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 ZNF500O60304 480 aaPredicted RBP9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 FOXH1O75593 365 aa9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 TRMUO75648 421 aaKnown RBP9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 RGS9O75916 674 aaPredicted RBP9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 OR7A10O76100 309 aa9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 LYPD3O95274 346 aa9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 IGHV2-5P01817 119 aa9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 F13BP05160 661 aa9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 ZNF133P52736 654 aaPredicted RBP9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 UGT2B15P54855 530 aa9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 MTPNP58546 118 aa9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 TAS2R41P59536 307 aa9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 RPL18Q07020 188 aaKnown RBP9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 CYLC2Q14093 348 aaPredicted RBP9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 SGCAQ16586 387 aa9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 C10orf128Q5T292 105 aa9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 ASB10Q8WXI3 467 aa9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 TSPAN32Q96QS1 320 aa9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 SEPHS2Q99611 448 aa9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 KAT8Q9H7Z6 458 aaKnown RBP9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 NANOGQ9H9S0 305 aa9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 ELOVL3Q9HB03 270 aa9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 MRGBPQ9NV56 204 aa9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 MED31Q9Y3C7 131 aa9.46□□□□□ -0.9
UBE2D3-219ENST00000505207 ANK2Q01484 3957 aa9.45□□□□□ -0.9
UBE2D3-219ENST00000505207 PPIAL4EA0A075B759 164 aa9.45□□□□□ -0.9
UBE2D3-219ENST00000505207 PPIAL4CA0A0B4J2A2 164 aa9.45□□□□□ -0.9
UBE2D3-219ENST00000505207 ISPDA4D126 451 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms