RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 DNAJC19Q96DA6 116 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ZNF385AQ96PM9 386 aaKnown RBP3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 NODALQ96S42 347 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 LPAR4Q99677 370 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ATP5SQ99766 215 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ECSITQ9BQ95 431 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SELENOSQ9BQE4 189 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 TMEM121Q9BTD3 319 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 FGFBP2Q9BYJ0 223 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ULBP2Q9BZM5 246 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 IKZF5Q9H5V7 419 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 KIR3DX1Q9H7L2 352 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 TREX1Q9NSU2 369 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 TMEM30AQ9NV96 361 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ZNF224Q9NZL3 707 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ZNF282Q9UDV7 671 aaPredicted RBP3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SCML1Q9UN30 329 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 HYOU1Q9Y4L1 999 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 OARD1Q9Y530 152 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 FADS3Q9Y5Q0 445 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ANKRD11Q6UB99 2663 aaPredicted RBP3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 KIAA1671Q9BY89 1806 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 NLRC5Q86WI3 1866 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ATG2AQ2TAZ0 1938 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 TRIOO75962 3097 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 C5orf42Q9H799 3197 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 COL4A4P53420 1690 aaPredicted RBP3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 RALGAPA2Q2PPJ7 1873 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 TRBV4-1A0A0J9YWV2 114 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 A0A1B0GTI1 187 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 A0A1W2PRF3 423 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 A0A1W2PRM7 423 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 PRSS37A4D1T9 235 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 FABP12A6NFH5 140 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 OR6C70A6NIJ9 312 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 LMO7DNF2Z398 122 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 MKRN2OSH3BPM6 223 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 TM9SF1O15321 606 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 EMC8O43402 210 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SLC19A2O60779 497 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ZMPSTE24O75844 475 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ERLIN2O94905 339 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 PGAM1P18669 254 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 HTR2CP28335 458 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CASP1P29466 404 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ACVR1BP36896 505 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 TNFSF9P41273 254 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 MAP3K8P41279 467 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CDKN2CP42773 168 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CEBPGP53567 150 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 MAGOHP61326 146 aaKnown RBP3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 PITPNAQ00169 270 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 MYL5Q02045 173 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ZNF33AQ06730 810 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 RAB40BQ12829 278 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SRSF9Q13242 221 aaKnown RBP eCLIP3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 KRTAP24-1Q3LI83 254 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ATP1A1-AS1Q5TC04 95 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ZNF658Q5TYW1 1059 aaPredicted RBP3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 FAHD2BQ6P2I3 314 aaPredicted RBP3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CERS6Q6ZMG9 384 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 Q6ZVQ6 151 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 TIPARPQ7Z3E1 657 aaKnown RBP3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 TSEN54Q7Z6J9 526 aaKnown RBP3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ZBTB8OSQ8IWT0 167 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ZNF100Q8IYN0 542 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 IQCKQ8N0W5 287 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SPAG16Q8N0X2 631 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SLC39A11Q8N1S5 342 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 TRAM1L1Q8N609 369 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ZNF248Q8NDW4 579 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 OR2T12Q8NG77 320 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 OR6N2Q8NGY6 317 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 LGALS14Q8TCE9 139 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 FAHD2AQ96GK7 314 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SERPINB11Q96P15 392 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CDX2Q99626 313 aaPredicted RBP3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 UCK2Q9BZX2 261 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 DERL2Q9GZP9 239 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SHARPINQ9H0F6 387 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CXCL16Q9H2A7 254 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 PIGUQ9H490 435 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 NXF3Q9H4D5 531 aaKnown RBP3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CWH43Q9H720 699 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 PELI2Q9HAT8 420 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 MRM3Q9HC36 420 aaKnown RBP3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 FKBP14Q9NWM8 211 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 TEX10Q9NXF1 929 aaPredicted RBP3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 USE1Q9NZ43 259 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 LNPEPQ9UIQ6 1025 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 RWDD2AQ9UIY3 292 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 KCNS2Q9ULS6 477 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SCML2Q9UQR0 700 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 HES2Q9Y543 173 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 GMPPBQ9Y5P6 360 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CHD6Q8TD26 2715 aa3.59□□□□□ -1.83
PDLIM1P4-201ENST00000504327 IGHV4OR15-8A0A075B7B6 117 aa3.58□□□□□ -1.84
PDLIM1P4-201ENST00000504327 A0A0A6YYD4 124 aa3.58□□□□□ -1.84
PDLIM1P4-201ENST00000504327 NSG1A0A0A6YYJ2 146 aa3.58□□□□□ -1.84
PDLIM1P4-201ENST00000504327 SNURFLB1AK76 121 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms