RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 NRMQ8IXM6 262 aa12.01□□□□□ -0.49
PDLIM7-211ENST00000504318 ZNF786Q8N393 782 aa12.01□□□□□ -0.49
PDLIM7-211ENST00000504318 SYT14Q8NB59 555 aa12.01□□□□□ -0.49
PDLIM7-211ENST00000504318 CPEB3Q8NE35 698 aaKnown RBP12.01□□□□□ -0.49
PDLIM7-211ENST00000504318 NEU4Q8WWR8 484 aaPredicted RBP12.01□□□□□ -0.49
PDLIM7-211ENST00000504318 MSI2Q96DH6 328 aaKnown RBP12.01□□□□□ -0.49
PDLIM7-211ENST00000504318 BPIFA2Q96DR5 249 aa12.01□□□□□ -0.49
PDLIM7-211ENST00000504318 HSH2DQ96JZ2 352 aa12.01□□□□□ -0.49
PDLIM7-211ENST00000504318 PIMREGQ9BSJ6 248 aa12.01□□□□□ -0.49
PDLIM7-211ENST00000504318 THTPAQ9BU02 230 aa12.01□□□□□ -0.49
PDLIM7-211ENST00000504318 SMURF2Q9HAU4 748 aa12.01□□□□□ -0.49
PDLIM7-211ENST00000504318 SLC7A8Q9UHI5 535 aa12.01□□□□□ -0.49
PDLIM7-211ENST00000504318 FBXO9Q9UK97 447 aaPredicted RBP12.01□□□□□ -0.49
PDLIM7-211ENST00000504318 FBXL3Q9UKT7 428 aa12.01□□□□□ -0.49
PDLIM7-211ENST00000504318 TRAV27A0A087WT01 109 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 HTR3EA5X5Y0 456 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 SYNGR3O43761 229 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 NCR1O76036 304 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 SERPINA1P01009 418 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 ADRA2AP08913 450 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 IFI30P13284 250 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 CCL2P13500 99 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 ZNF250P15622 560 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 ZNF23P17027 643 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 IGFBP5P24593 272 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 IL2RGP31785 369 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 CDAP32320 146 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 CLRN1P58418 232 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 ERVS71-1P61550 626 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 SNCBQ16143 134 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 ALG10Q5BKT4 473 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 TBPL2Q6SJ96 375 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 DEFB107AQ8IZN7 70 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 SLC30A7Q8NEW0 376 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 GEMIN6Q8WXD5 167 aaKnown RBP12□□□□□ -0.49
PDLIM7-211ENST00000504318 C1orf159Q96HA4 380 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 C7orf34Q96L11 122 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 TSPAN32Q96QS1 320 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 FUZQ9BT04 418 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 RAB1BQ9H0U4 201 aa12□□□□□ -0.49
PDLIM7-211ENST00000504318 ZNF346Q9UL40 294 aaKnown RBP12□□□□□ -0.49
PDLIM7-211ENST00000504318 LYNX1G3V0Z9 82 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 HPXP02790 462 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 SEMG1P04279 462 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 IFNW1P05000 195 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 SCG5P05408 212 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 LYNX1P0DP58 116 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 DAOP14920 347 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 NCK1P16333 377 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 ALDH3B1P43353 468 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 LIMS1P48059 325 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 FXYD6P3P58550 94 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 PSME3P61289 254 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 RPL27P61353 136 aaKnown RBP11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 GGTLC2Q14390 218 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 MAD2L1BPQ15013 274 aaPredicted RBP11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 TRAM2Q15035 370 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 TAF11Q15544 211 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 SPATS1Q496A3 300 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 IFI44LQ53G44 452 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 CYB5R2Q6BCY4 276 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 TMPRSS11FQ6ZWK6 438 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 MBOAT2Q6ZWT7 520 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 SLC16A14Q7RTX9 510 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 FAM122BQ7Z309 247 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 DPPA2Q7Z7J5 298 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 IGFN1Q86VF2 1251 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 RNF113BQ8IZP6 322 aaKnown RBP11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 FAM86B1Q8N7N1 296 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 ARIH2OSQ8N7S6 290 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 OR13C2Q8NGS9 318 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 SLC7A13Q8TCU3 470 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 ACOT11Q8WXI4 607 aaPredicted RBP11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 DHRS1Q96LJ7 313 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 SYT3Q9BQG1 590 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 ALG12Q9BV10 488 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 TPK1Q9H3S4 243 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 SIAEQ9HAT2 523 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 FZR1Q9UM11 496 aa11.99□□□□□ -0.49
PDLIM7-211ENST00000504318 LOC100509620A0A075B734 347 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 SH3PXD2BA1X283 911 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 LRP5LA4QPB2 252 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 MCIDASD6RGH6 385 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 M0R233 179 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 ICMTO60725 284 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 PTP4A3O75365 173 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 ATP6V1G2O95670 118 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 CLPTM1O96005 669 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 ZNF32P17041 273 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 WNT5AP41221 380 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 TRIP10Q15642 601 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 ANKDD1AQ495B1 522 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 FAM27BQ5VT28 67 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 HDDC2Q7Z4H3 204 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 LRRC18Q8N456 261 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 UBASH3BQ8TF42 649 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 LZICQ8WZA0 190 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 STMN2Q93045 179 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 YIPF5Q969M3 257 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 POM121L2Q96KW2 1035 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms