RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 TRAV8-7A0A075B6U6 113 aa6.33□□□□□ -1.4
SNX25-202ENST00000504273 EFNA2O43921 213 aa6.33□□□□□ -1.4
SNX25-202ENST00000504273 EIF4E2O60573 245 aaKnown RBP6.33□□□□□ -1.4
SNX25-202ENST00000504273 GLAP06280 429 aa6.33□□□□□ -1.4
SNX25-202ENST00000504273 CD3GP09693 182 aa6.33□□□□□ -1.4
SNX25-202ENST00000504273 PRKAR1AP10644 381 aa6.33□□□□□ -1.4
SNX25-202ENST00000504273 HLA-DOBP13765 273 aa6.33□□□□□ -1.4
SNX25-202ENST00000504273 HPGDP15428 266 aa6.33□□□□□ -1.4
SNX25-202ENST00000504273 MMP15P51511 669 aa6.33□□□□□ -1.4
SNX25-202ENST00000504273 CD83Q01151 205 aa6.33□□□□□ -1.4
SNX25-202ENST00000504273 EFR3AQ14156 821 aa6.33□□□□□ -1.4
SNX25-202ENST00000504273 EMC4Q5J8M3 183 aa6.33□□□□□ -1.4
SNX25-202ENST00000504273 ARHGAP40Q5TG30 622 aa6.33□□□□□ -1.4
SNX25-202ENST00000504273 LIX1LQ8IVB5 337 aa6.33□□□□□ -1.4
SNX25-202ENST00000504273 ZNF563Q8TA94 476 aa6.33□□□□□ -1.4
SNX25-202ENST00000504273 GCDHQ92947 438 aaPredicted RBP6.33□□□□□ -1.4
SNX25-202ENST00000504273 PPP1R14AQ96A00 147 aa6.33□□□□□ -1.4
SNX25-202ENST00000504273 RFT1Q96AA3 541 aa6.33□□□□□ -1.4
SNX25-202ENST00000504273 FOXN4Q96NZ1 517 aa6.33□□□□□ -1.4
SNX25-202ENST00000504273 OR11A1Q9GZK7 315 aa6.33□□□□□ -1.4
SNX25-202ENST00000504273 SYT4Q9H2B2 425 aa6.33□□□□□ -1.4
SNX25-202ENST00000504273 AUNIPQ9H7T9 357 aa6.33□□□□□ -1.4
SNX25-202ENST00000504273 SLCO1C1Q9NYB5 712 aa6.33□□□□□ -1.4
SNX25-202ENST00000504273 ABRACLQ9P1F3 81 aa6.33□□□□□ -1.4
SNX25-202ENST00000504273 ADAM30Q9UKF2 790 aa6.33□□□□□ -1.4
SNX25-202ENST00000504273 SDK1Q7Z5N4 2213 aa6.33□□□□□ -1.4
SNX25-202ENST00000504273 TRAV36DV7A0A075B6V5 113 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 TRBV5-7A0A0A0MS05 114 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 TMED7-TICAM2A0A0A6YYA0 188 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 IGLV1-36A0A0B4J1U3 117 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 SMLR1H3BR10 107 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 FLRT2O43155 660 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 GSTZ1O43708 216 aaPredicted RBP6.32□□□□□ -1.4
SNX25-202ENST00000504273 GPRIN2O60269 458 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 RPP14O95059 124 aaKnown RBP6.32□□□□□ -1.4
SNX25-202ENST00000504273 SERPINA3P01011 423 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 ARSBP15848 533 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 SLC6A8P48029 635 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 CLDN12P56749 244 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 RNF4P78317 190 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 PLCXD2Q0VAA5 305 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 ALKBH1Q13686 389 aaKnown RBP6.32□□□□□ -1.4
SNX25-202ENST00000504273 KLF9Q13886 244 aaPredicted RBP6.32□□□□□ -1.4
SNX25-202ENST00000504273 CACNA1EQ15878 2313 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 HES5Q5TA89 166 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 LAMTOR1Q6IAA8 161 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 PYHIN1Q6K0P9 492 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 GUSBP11Q6P575 273 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 NHLRC1Q6VVB1 395 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 ANKRD37Q7Z713 158 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 JAZF1Q86VZ6 243 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 SIAH3Q8IW03 269 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 TCTE3Q8IZS6 198 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 YIPF7Q8N8F6 280 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 STT3BQ8TCJ2 826 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 UBASH3BQ8TF42 649 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 DUSP19Q8WTR2 217 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 HGDQ93099 445 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 C8orf44Q96CB5 159 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 ADAD1Q96M93 576 aaKnown RBP6.32□□□□□ -1.4
SNX25-202ENST00000504273 OR2B2Q9GZK3 357 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 DCAF16Q9NXF7 216 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 GRHPRQ9UBQ7 328 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 TMED7Q9Y3B3 224 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 CACNG2Q9Y698 323 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 CABIN1Q9Y6J0 2220 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 A0A0A6YYJ9 748 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 SPAARA0A1B0GVQ0 90 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 FAM240BA0A1B0GVZ2 78 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 IFITM5A6NNB3 132 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 C11orf98E9PRG8 122 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 MS4A18H0YCH9 400 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 PLPP3O14495 311 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 SUSD5O60279 629 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 CDC40O60508 579 aaKnown RBP eCLIP6.32□□□□□ -1.4
SNX25-202ENST00000504273 PNPP00491 289 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 IL12BP29460 328 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 PTGDSP41222 190 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 PTH2RP49190 550 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 P2RX1P51575 399 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 RAB25P57735 213 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 CDK10Q15131 360 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 MS4A18Q3C1V0 323 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 HSD17B12Q53GQ0 312 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 YIF1BQ5BJH7 314 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 RNASE12Q5GAN4 147 aaKnown RBP6.32□□□□□ -1.4
SNX25-202ENST00000504273 TOR2AQ5JU69 321 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 ZNF57Q68EA5 555 aaPredicted RBP6.32□□□□□ -1.4
SNX25-202ENST00000504273 OR5M10Q6IEU7 315 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 RHBDD2Q6NTF9 364 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 MZT2BQ6NZ67 158 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 PLET1Q6UQ28 207 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 STAC2Q6ZMT1 411 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 DPY19L4Q7Z388 723 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 NOXA1Q86UR1 476 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 KMT5CQ86Y97 462 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 GALNT11Q8NCW6 608 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 AKIRIN1Q9H9L7 192 aaPredicted RBP6.32□□□□□ -1.4
SNX25-202ENST00000504273 OR5V1Q9UGF6 321 aa6.32□□□□□ -1.4
SNX25-202ENST00000504273 KCNG2Q9UJ96 466 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms