RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 KRT16P08779 473 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 ZNF853P0CG23 659 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 NR2C1P13056 603 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 IGLL1P15814 213 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 BGNP21810 368 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 HTR1FP30939 366 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 CALCRP30988 508 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 CSKP41240 450 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 KIR2DS2P43631 304 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 GPR1P46091 355 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 RGRP47804 291 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 UCNP55089 124 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 STX17P56962 302 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 RIPK4P57078 832 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 FBXW4P57775 412 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 ADARB1P78563 741 aaKnown RBP1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 MRPS15P82914 257 aaKnown RBP1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 NDPQ00604 133 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 SLC10A7Q0GE19 358 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 ART3Q13508 389 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 OXA1LQ15070 435 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 KYAT1Q16773 422 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 LRRC36Q1X8D7 754 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 PGGHGQ32M88 737 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 CARD16Q5EG05 197 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 SAMD4BQ5PRF9 694 aaKnown RBP1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 ZNF544Q6NX49 715 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 PRMT9Q6P2P2 845 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 TMPRSS11AQ6ZMR5 421 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 DNM1P46Q6ZS02 220 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 TPGS1Q6ZTW0 290 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 PLCZ1Q86YW0 608 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 ZNF100Q8IYN0 542 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 SYS1Q8N2H4 156 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 LIX1Q8N485 282 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 MS4A15Q8N5U1 240 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 TRAM1L1Q8N609 369 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 C14orf178Q8N769 122 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 SNX31Q8N9S9 440 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 CATSPER1Q8NEC5 780 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 OR7G1Q8NGA0 311 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 OR4D6Q8NGJ1 314 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 OR5K2Q8NHB8 316 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 LYPD6BQ8NI32 183 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 NUBPLQ8TB37 319 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 TMEM239Q8WW34 195 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 TNFRSF14Q92956 283 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 ISOC2Q96AB3 205 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 APH1AQ96BI3 265 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 FGGYQ96C11 551 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 LRRC45Q96CN5 670 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 FAM122AQ96E09 287 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 RNF170Q96K19 258 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 HSFY1Q96LI6 401 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 MAGEB18Q96M61 343 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 TSSK3Q96PN8 268 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 ZNF184Q99676 751 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 MCHR1Q99705 422 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 SH3GL1Q99961 368 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 CNPY3Q9BT09 278 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 MED10Q9BTT4 135 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 OSBPL10Q9BXB5 764 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 ZYG11BQ9C0D3 744 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 DEFB129Q9H1M3 183 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 OR51M1Q9H341 326 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 PTGES2Q9H7Z7 377 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 MRPL47Q9HD33 250 aaKnown RBP1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 VCX3AQ9NNX9 186 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 PLSCR3Q9NRY6 295 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 NKIRAS1Q9NYS0 192 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 CCDC59Q9P031 241 aaKnown RBP1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 IL17CQ9P0M4 197 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 TMEM9Q9P0T7 183 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 ZNF282Q9UDV7 671 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 WARS2Q9UGM6 360 aaKnown RBP1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 KIF25Q9UIL4 384 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 ENPP5Q9UJA9 477 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 LSM7Q9UK45 103 aaKnown RBP1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 DDX19BQ9UMR2 479 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 UBQLN1Q9UMX0 589 aaKnown RBP1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 SLC17A4Q9Y2C5 497 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 PLLPQ9Y342 182 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 KIF25-AS1Q9Y6Z4 181 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 BRD4O60885 1362 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P35-201ENST00000503360 TNRQ92752 1358 aa1.73□□□□□ -2.13
HMGB1P35-201ENST00000503360 PLEKHH1Q9ULM0 1364 aa1.73□□□□□ -2.13
HMGB1P35-201ENST00000503360 C1orf232A0A0U1RR37 186 aa1.73□□□□□ -2.13
HMGB1P35-201ENST00000503360 A0A1B0GWB2 263 aa1.73□□□□□ -2.13
HMGB1P35-201ENST00000503360 MGAT4DA6NG13 374 aa1.73□□□□□ -2.13
HMGB1P35-201ENST00000503360 SLC22A20A6NK97 555 aa1.73□□□□□ -2.13
HMGB1P35-201ENST00000503360 VSTM2BA6NLU5 285 aa1.73□□□□□ -2.13
HMGB1P35-201ENST00000503360 KLLNB2CW77 178 aa1.73□□□□□ -2.13
HMGB1P35-201ENST00000503360 RNASEK-C17orf49H0YIS7 233 aa1.73□□□□□ -2.13
HMGB1P35-201ENST00000503360 CCL21O00585 134 aa1.73□□□□□ -2.13
HMGB1P35-201ENST00000503360 PRMT5O14744 637 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P35-201ENST00000503360 PPP1R2P9O14990 202 aa1.73□□□□□ -2.13
HMGB1P35-201ENST00000503360 ZBTB5O15062 677 aa1.73□□□□□ -2.13
HMGB1P35-201ENST00000503360 RAD51BO15315 384 aa1.73□□□□□ -2.13
HMGB1P35-201ENST00000503360 HDAC3O15379 428 aa1.73□□□□□ -2.13
HMGB1P35-201ENST00000503360 GMDSO60547 372 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms