RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 OR2G6Q5TZ20 316 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 FOXB2Q5VYV0 432 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 DEGS2Q6QHC5 323 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 C19orf48Q6RUI8 117 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 UNQ6494/PRO21346Q6UXR6 183 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 B3GLCTQ6Y288 498 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 RHOUQ7L0Q8 258 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 VASH1Q7L8A9 365 aaPredicted RBP7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 ABHD12BQ7Z5M8 362 aaPredicted RBP7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 PHC2Q8IXK0 858 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 C20orf196Q8IYI0 205 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 TMEM123Q8N131 208 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 GPR137CQ8N3F9 429 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 ZNF511Q8NB15 262 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 ZNF485Q8NCK3 441 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 SLC26A10Q8NG04 563 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 OTOSQ8NHW6 89 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 GATAD2BQ8WXI9 593 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 ROBO4Q8WZ75 1007 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 MCHR2Q969V1 340 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 ZNF845Q96IR2 970 aaPredicted RBP7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 C4orf36Q96KX1 117 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 ZNF385AQ96PM9 386 aaKnown RBP7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 TBX5Q99593 518 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 ULBP2Q9BZM5 246 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 LINC00470Q9BZP3 86 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 NDUFB11Q9NX14 153 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 PTTG2Q9NZH5 202 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 FOXD3Q9UJU5 478 aaPredicted RBP7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 STUB1Q9UNE7 303 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 SSR3Q9UNL2 185 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 CAMK2AQ9UQM7 478 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 TP53TG5Q9Y2B4 290 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 NOSIPQ9Y314 301 aaKnown RBP7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 LIPGQ9Y5X9 500 aa7.22□□□□□ -1.25
TOPBP1-202ENST00000503338 FREM3P0C091 2139 aa7.21□□□□□ -1.25
TOPBP1-202ENST00000503338 TVP23AA6NH52 213 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 TRIM64BA6NI03 449 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 SLC22A20A6NK97 555 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 J3QLW9 94 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 DHHO43323 396 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 AIREO43918 545 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 SERPINA3P01011 423 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 HLA-DPB1P04440 258 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 YES1P07947 543 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 GAAP10253 952 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 GABRA1P14867 456 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 ZNF19P17023 458 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 MSR1P21757 451 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 TGFBR2P37173 567 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 TGM4P49221 684 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 TUBA1BP68363 451 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 PMP22Q01453 160 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 ROM1Q03395 351 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 EIF2S3LQ2VIR3 472 aaKnown RBP7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 CARD17Q5XLA6 110 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 OR2A2Q6IF42 318 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 RPL22L1Q6P5R6 122 aaKnown RBP7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 FOXL2NBQ6ZUU3 175 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 TUBA1AQ71U36 451 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 DPY19L4Q7Z388 723 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 P4HA3Q7Z4N8 544 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 ADGRE4PQ86SQ3 457 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 LSRQ86X29 649 aaPredicted RBP7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 ZNF679Q8IYX0 411 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 MS4A15Q8N5U1 240 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 ZIC4Q8N9L1 334 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 OR2AJ1Q8NGZ0 328 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 FNDC9Q8TBE3 224 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 CPT1CQ8TCG5 803 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 ABHD3Q8WU67 409 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 THEM6Q8WUY1 208 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 ZNRF4Q8WWF5 429 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 ZCCHC14Q8WYQ9 949 aaKnown RBP7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 NSMAFQ92636 917 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 THRSPQ92748 146 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 EXTL1Q92935 676 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 WNT2BQ93097 391 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 C12orf43Q96C57 262 aaKnown RBP7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 GMPPAQ96IJ6 420 aaPredicted RBP7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 GPR137Q96N19 417 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 MROQ9BYG7 248 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 NELFAQ9H3P2 528 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 C1orf198Q9H425 327 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 CALHM2Q9HA72 323 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 SIAEQ9HAT2 523 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 SPRR3Q9UBC9 169 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 COPS3Q9UNS2 423 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 LHX6Q9UPM6 363 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 GSTK1Q9Y2Q3 226 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 POLR1DQ9Y2S0 133 aa7.21□□□□□ -1.26
TOPBP1-202ENST00000503338 ALPK2Q86TB3 2170 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 MED12Q93074 2177 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 A0A1W2PPL8 197 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 FIGNL2A6NMB9 653 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 H3BMQ9 156 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 PLPP2O43688 288 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 GPRIN2O60269 458 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 WDR1O75083 606 aa7.2□□□□□ -1.26
TOPBP1-202ENST00000503338 KRT33AO76009 404 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms