RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 RRM2BQ7LG56 351 aa13.85□□□□□ -0.19
NR1H3-227ENST00000498548 HDDC2Q7Z4H3 204 aa13.85□□□□□ -0.19
NR1H3-227ENST00000498548 CYP4Z1Q86W10 505 aa13.85□□□□□ -0.19
NR1H3-227ENST00000498548 RNF113BQ8IZP6 322 aaKnown RBP13.85□□□□□ -0.19
NR1H3-227ENST00000498548 NEU4Q8WWR8 484 aaPredicted RBP13.85□□□□□ -0.19
NR1H3-227ENST00000498548 NABP1Q96AH0 204 aa13.85□□□□□ -0.19
NR1H3-227ENST00000498548 FAM46AQ96IP4 442 aaKnown RBP13.85□□□□□ -0.19
NR1H3-227ENST00000498548 BPESC1Q9GZL8 116 aa13.85□□□□□ -0.19
NR1H3-227ENST00000498548 SPAG4Q9NPE6 437 aa13.85□□□□□ -0.19
NR1H3-227ENST00000498548 ARL8BQ9NVJ2 186 aa13.85□□□□□ -0.19
NR1H3-227ENST00000498548 SLC7A8Q9UHI5 535 aa13.85□□□□□ -0.19
NR1H3-227ENST00000498548 RPS6KA6Q9UK32 745 aa13.85□□□□□ -0.19
NR1H3-227ENST00000498548 FBXL3Q9UKT7 428 aa13.85□□□□□ -0.19
NR1H3-227ENST00000498548 IQCMA0A1B0GVH7 501 aa13.84□□□□□ -0.19
NR1H3-227ENST00000498548 SYNGR3O43761 229 aa13.84□□□□□ -0.19
NR1H3-227ENST00000498548 MGRN1O60291 552 aa13.84□□□□□ -0.19
NR1H3-227ENST00000498548 IGHMP01871 453 aa13.84□□□□□ -0.19
NR1H3-227ENST00000498548 ZNF16P17020 682 aaPredicted RBP13.84□□□□□ -0.19
NR1H3-227ENST00000498548 ZNF32P17041 273 aa13.84□□□□□ -0.19
NR1H3-227ENST00000498548 CCNOP22674 350 aa13.84□□□□□ -0.19
NR1H3-227ENST00000498548 MRPS34P82930 218 aaKnown RBP13.84□□□□□ -0.19
NR1H3-227ENST00000498548 HSF2Q03933 536 aa13.84□□□□□ -0.19
NR1H3-227ENST00000498548 PLP2Q04941 152 aa13.84□□□□□ -0.19
NR1H3-227ENST00000498548 TAF11Q15544 211 aa13.84□□□□□ -0.19
NR1H3-227ENST00000498548 PABPC1L2AQ5JQF8 200 aa13.84□□□□□ -0.19
NR1H3-227ENST00000498548 ICA1LQ8NDH6 482 aa13.84□□□□□ -0.19
NR1H3-227ENST00000498548 CPEB3Q8NE35 698 aaKnown RBP13.84□□□□□ -0.19
NR1H3-227ENST00000498548 AKR7LQ8NHP1 331 aa13.84□□□□□ -0.19
NR1H3-227ENST00000498548 ZNF519Q8TB69 540 aa13.84□□□□□ -0.19
NR1H3-227ENST00000498548 SLC7A13Q8TCU3 470 aa13.84□□□□□ -0.19
NR1H3-227ENST00000498548 UBASH3BQ8TF42 649 aa13.84□□□□□ -0.19
NR1H3-227ENST00000498548 RBP7Q96R05 134 aa13.84□□□□□ -0.19
NR1H3-227ENST00000498548 KCNN2Q9H2S1 579 aa13.84□□□□□ -0.19
NR1H3-227ENST00000498548 SIAEQ9HAT2 523 aa13.84□□□□□ -0.19
NR1H3-227ENST00000498548 CCNB1IP1Q9NPC3 277 aa13.84□□□□□ -0.19
NR1H3-227ENST00000498548 DCAF13Q9NV06 445 aaKnown RBP13.84□□□□□ -0.19
NR1H3-227ENST00000498548 NDUFAF4Q9P032 175 aa13.84□□□□□ -0.19
NR1H3-227ENST00000498548 STX18Q9P2W9 335 aaKnown RBP13.84□□□□□ -0.19
NR1H3-227ENST00000498548 ADAM18Q9Y3Q7 739 aa13.84□□□□□ -0.19
NR1H3-227ENST00000498548 A0A1W2PPL8 197 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 LRP5LA4QPB2 252 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 HTR3EA5X5Y0 456 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 NPIPB13A6NJU9 1138 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 NPIPB4C9JG80 1138 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 M0R233 179 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 NDUFS8O00217 210 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 SCG5P05408 212 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 LCKP06239 509 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 H1F0P07305 194 aaKnown RBP13.83□□□□□ -0.2
NR1H3-227ENST00000498548 ERCC1P07992 297 aaPredicted RBP13.83□□□□□ -0.2
NR1H3-227ENST00000498548 NAT2P11245 290 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 APEHP13798 732 aaKnown RBP13.83□□□□□ -0.2
NR1H3-227ENST00000498548 LAP3P28838 519 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 RPL4P36578 427 aaKnown RBP13.83□□□□□ -0.2
NR1H3-227ENST00000498548 EVX1P49640 407 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 TBC1D28Q2M2D7 210 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 ZBED5Q49AG3 693 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 FGD3Q5JSP0 725 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 THEM4Q5T1C6 240 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 RGS7BPQ6MZT1 257 aaPredicted RBP13.83□□□□□ -0.2
NR1H3-227ENST00000498548 TMPRSS11FQ6ZWK6 438 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 PIGWQ7Z7B1 504 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 DPPA2Q7Z7J5 298 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 HIPK1Q86Z02 1210 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 OR52J3Q8NH60 311 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 C7orf34Q96L11 122 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 Q96M85 177 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 ALG12Q9BV10 488 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 MYOZ1Q9NP98 299 aaPredicted RBP13.83□□□□□ -0.2
NR1H3-227ENST00000498548 TAAR3PQ9P1P4 343 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 FBXO9Q9UK97 447 aaPredicted RBP13.83□□□□□ -0.2
NR1H3-227ENST00000498548 FAM32AQ9Y421 112 aaKnown RBP13.83□□□□□ -0.2
NR1H3-227ENST00000498548 MALRD1Q5VYJ5 2156 aa13.83□□□□□ -0.2
NR1H3-227ENST00000498548 SONP18583 2426 aaKnown RBP13.83□□□□□ -0.2
NR1H3-227ENST00000498548 TRBV4-1A0A0J9YWV2 114 aa13.82□□□□□ -0.2
NR1H3-227ENST00000498548 A0A1W2PPW3 197 aa13.82□□□□□ -0.2
NR1H3-227ENST00000498548 IMPA2O14732 288 aa13.82□□□□□ -0.2
NR1H3-227ENST00000498548 GMNNO75496 209 aa13.82□□□□□ -0.2
NR1H3-227ENST00000498548 PTHP01270 115 aa13.82□□□□□ -0.2
NR1H3-227ENST00000498548 HPXP02790 462 aa13.82□□□□□ -0.2
NR1H3-227ENST00000498548 COL8A2P25067 703 aa13.82□□□□□ -0.2
NR1H3-227ENST00000498548 APLNRP35414 380 aa13.82□□□□□ -0.2
NR1H3-227ENST00000498548 SLC9A3P48764 834 aa13.82□□□□□ -0.2
NR1H3-227ENST00000498548 UCP2P55851 309 aa13.82□□□□□ -0.2
NR1H3-227ENST00000498548 RPS23P62266 143 aaKnown RBP13.82□□□□□ -0.2
NR1H3-227ENST00000498548 PSG4Q00888 419 aa13.82□□□□□ -0.2
NR1H3-227ENST00000498548 SEC23BQ15437 767 aa13.82□□□□□ -0.2
NR1H3-227ENST00000498548 NRN1LQ496H8 165 aa13.82□□□□□ -0.2
NR1H3-227ENST00000498548 OTPQ5XKR4 325 aa13.82□□□□□ -0.2
NR1H3-227ENST00000498548 UGT2A3Q6UWM9 527 aa13.82□□□□□ -0.2
NR1H3-227ENST00000498548 ARIH2OSQ8N7S6 290 aa13.82□□□□□ -0.2
NR1H3-227ENST00000498548 OR1J2Q8NGS2 313 aa13.82□□□□□ -0.2
NR1H3-227ENST00000498548 CDRT15Q96T59 188 aa13.82□□□□□ -0.2
NR1H3-227ENST00000498548 MDFIQ99750 246 aa13.82□□□□□ -0.2
NR1H3-227ENST00000498548 SOX7Q9BT81 388 aa13.82□□□□□ -0.2
NR1H3-227ENST00000498548 SMURF2Q9HAU4 748 aa13.82□□□□□ -0.2
NR1H3-227ENST00000498548 IL20RAQ9UHF4 553 aa13.82□□□□□ -0.2
NR1H3-227ENST00000498548 TAGLN3Q9UI15 199 aa13.82□□□□□ -0.2
NR1H3-227ENST00000498548 SAMD4AQ9UPU9 718 aaKnown RBP13.82□□□□□ -0.2
NR1H3-227ENST00000498548 ARL2BPQ9Y2Y0 163 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms