RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 GTF3C1Q12789 2109 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 CDC20Q12834 499 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 CYP1B1Q16678 543 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 SPATA45Q537H7 98 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 BOLA3Q53S33 107 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 PAGE2BQ5JRK9 111 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 ENTPD8Q5MY95 495 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 PRR9Q5T870 116 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 SIGIRRQ6IA17 410 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 OPN5Q6U736 354 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 ENPP6Q6UWR7 440 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 VSTM1Q6UX27 236 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 FAM43BQ6ZT52 329 aaPredicted RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 ADCK1Q86TW2 530 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 VASH2Q86V25 355 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 PIGZQ86VD9 579 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 TMEM99Q8N816 258 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 OR4K2Q8NGD2 314 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 OR1J4Q8NGS1 313 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 OR13C4Q8NGS5 318 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 TERB2Q8NHR7 220 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 ZFAND1Q8TCF1 268 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 SERPINB12Q96P63 405 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 TWNKQ96RR1 684 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 SPNS1Q9H2V7 528 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 AS3MTQ9HBK9 375 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 CDH20Q9HBT6 801 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 THUMPD1Q9NXG2 353 aaKnown RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 GRHL1Q9NZI5 618 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 CLDN16Q9Y5I7 305 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 PKD1L1Q8TDX9 2849 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 MYO7BQ6PIF6 2116 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 ZSWIM8A7E2V4 1837 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 SMIM26A0A096LP01 95 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 TVP23AA6NH52 213 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 CD8B2A6NJW9 211 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 G3V3Y1 287 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 K7ERS5 55 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 GOSR2O14653 212 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 TOX3O15405 576 aaPredicted RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 FGF10O15520 208 aaPredicted RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 MPZL2O60487 215 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 DPM1O60762 260 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 FLOT1O75955 427 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 FYNP06241 537 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 POLBP06746 335 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 OR5AL1P0C617 328 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 THEGLP0DJG4 465 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 SETSIPP0DME0 302 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 COX7A1P24310 79 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 CAPZA2P47755 286 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 TUBP50607 506 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 PTTG1IPP53801 180 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 SLC16A1P53985 500 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 AK2P54819 239 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 RPL32P62910 135 aaKnown RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 SCGB2A2Q13296 93 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 KLF1Q13351 362 aaPredicted RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 FGFBP1Q14512 234 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 ZNF684Q5T5D7 378 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 CRTC1Q6UUV9 634 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 TAS2R42Q7RTR8 314 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 C11orf96Q7Z7L8 435 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 ISCA2Q86U28 154 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 KMT5CQ86Y97 462 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 GPALPP1Q8IXQ4 340 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 PM20D2Q8IYS1 436 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 RNF149Q8NC42 400 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 LFNGQ8NES3 379 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 SSMEM1Q8WWF3 244 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 LIPHQ8WWY8 451 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 GNPNAT1Q96EK6 184 aaPredicted RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 DNAJA3Q96EY1 480 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 ARL5BQ96KC2 179 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 C12orf66Q96MD2 445 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 PCYT2Q99447 389 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 NPY6RQ99463 290 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 CDCA3Q99618 268 aaPredicted RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 EBF4Q9BQW3 602 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 MED18Q9BUE0 208 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 MXD3Q9BW11 206 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 CCDC90BQ9GZT6 254 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 EGLN1Q9GZT9 426 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 IL36BQ9NZH7 164 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 OR6C3Q9NZP0 311 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 FLVCR2Q9UPI3 526 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 FLVCR1Q9Y5Y0 555 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 CD163L1Q9NR16 1453 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 SEC16AO15027 2179 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 TRIM43BA6NCK2 446 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 A8MUI8 341 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 K7EPI3 171 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 LGALS8O00214 317 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 SMAD7O15105 426 aaKnown RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 SGTAO43765 313 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 GLUD1P00367 558 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 HPNP05981 417 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 ATP5BP06576 529 aaKnown RBP1.25□□□□□ -2.21
XRN1-214ENST00000498077 CTSBP07858 339 aa1.25□□□□□ -2.21
XRN1-214ENST00000498077 HTR1AP08908 422 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms