RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 PITPNBP48739 271 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 CNN1P51911 297 aaKnown RBP2.04□□□□□ -2.08
RIF1-212ENST00000498041 HNRNPFP52597 415 aaKnown RBP2.04□□□□□ -2.08
RIF1-212ENST00000498041 ZNF85Q03923 595 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 CSTF1Q05048 431 aaKnown RBP2.04□□□□□ -2.08
RIF1-212ENST00000498041 ZNF33BQ06732 778 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 CD47Q08722 323 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 C17orf67Q0P5P2 114 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 BNIP1Q12981 228 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 ASAH1Q13510 395 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 CST6Q15828 149 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 ZIC1Q15915 447 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 CLPPQ16740 277 aaPredicted RBP2.04□□□□□ -2.08
RIF1-212ENST00000498041 DEFB110Q30KQ9 67 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 HNRNPA1L2Q32P51 320 aaKnown RBP2.04□□□□□ -2.08
RIF1-212ENST00000498041 PARP15Q460N3 678 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 TMEM52BQ4KMG9 183 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 PAN3Q58A45 887 aaKnown RBP2.04□□□□□ -2.08
RIF1-212ENST00000498041 HSP90B2PQ58FF3 399 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 PTRHD1Q6GMV3 140 aaKnown RBP2.04□□□□□ -2.08
RIF1-212ENST00000498041 PNCKQ6P2M8 343 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 TBPL2Q6SJ96 375 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 ADAMTSL5Q6ZMM2 481 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 TRPM8Q7Z2W7 1104 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 TMEM179BQ7Z7N9 219 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 COMTD1Q86VU5 262 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 RANBP3LQ86VV4 465 aaPredicted RBP2.04□□□□□ -2.08
RIF1-212ENST00000498041 SNX32Q86XE0 403 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 CNTN4Q8IWV2 1026 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 UBQLNLQ8IYU4 475 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 COL27A1Q8IZC6 1860 aaPredicted RBP2.04□□□□□ -2.08
RIF1-212ENST00000498041 CLECL1Q8IZS7 167 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 GPR137CQ8N3F9 429 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 CHCHD4Q8N4Q1 142 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 DEFB123Q8N688 67 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 EIF1ADQ8N9N8 165 aaKnown RBP2.04□□□□□ -2.08
RIF1-212ENST00000498041 DCAF4L2Q8NA75 395 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 TMEM37Q8WXS4 190 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 ELMO1Q92556 727 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 TCEAL3Q969E4 200 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 LHX4Q969G2 390 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 RCN3Q96D15 328 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 DNAJA3Q96EY1 480 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 AURKBQ96GD4 344 aaPredicted RBP2.04□□□□□ -2.08
RIF1-212ENST00000498041 TBC1D10AQ9BXI6 508 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 TRIM4Q9C037 500 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 IL22Q9GZX6 179 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 OR51B5Q9H339 312 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 UBE2ZQ9H832 354 aaPredicted RBP2.04□□□□□ -2.08
RIF1-212ENST00000498041 CMTM6Q9NX76 183 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 FBXL12Q9NXK8 326 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 TAS2R1Q9NYW7 299 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 CHD7Q9P2D1 2997 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 DPM3Q9P2X0 92 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 DEC1Q9P2X7 70 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 APOBEC3BQ9UH17 382 aaKnown RBP2.04□□□□□ -2.08
RIF1-212ENST00000498041 CRLS1Q9UJA2 301 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 LSM7Q9UK45 103 aaKnown RBP2.04□□□□□ -2.08
RIF1-212ENST00000498041 PCTPQ9UKL6 214 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 MOKQ9UQ07 419 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 HS3ST2Q9Y278 367 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 NTNG1Q9Y2I2 539 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 KLHDC2Q9Y2U9 406 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 TDRKHQ9Y2W6 561 aaKnown RBP2.04□□□□□ -2.08
RIF1-212ENST00000498041 DHRS7Q9Y394 339 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 PPIL1Q9Y3C6 166 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 ZNF175Q9Y473 711 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 POLR3HQ9Y535 204 aaPredicted RBP2.04□□□□□ -2.08
RIF1-212ENST00000498041 DNAJC15Q9Y5T4 150 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 KCNE3Q9Y6H6 103 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 MKI67P46013 3256 aaKnown RBP2.04□□□□□ -2.08
RIF1-212ENST00000498041 FBN3Q75N90 2809 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 ANKRD11Q6UB99 2663 aaPredicted RBP2.04□□□□□ -2.08
RIF1-212ENST00000498041 GOLGA4Q13439 2230 aaKnown RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 ASXL3Q9C0F0 2248 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 RP1P56715 2156 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 PI4KAP42356 2102 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 NINQ8N4C6 2090 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 A0A0J9YVX5 310 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 TSPAN11A1L157 253 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 MFSD2BA6NFX1 497 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 ZNF860A6NHJ4 632 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 FAM220BPB1ANY3 271 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 C11orf98E9PRG8 122 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 G3V3Y1 287 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 PDLIM1O00151 329 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 TLR4O00206 839 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 DFNA5O60443 496 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 ALOX12BO75342 701 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 BCAS1O75363 584 aaPredicted RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 EEDO75530 441 aaKnown RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 GCM2O75603 506 aaPredicted RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 KIAA0754O94854 1291 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 DIRAS1O95057 198 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 LYPD3O95274 346 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 SYNGR4O95473 234 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 C1orf105O95561 183 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 SERPINE1P05121 402 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 RPS17P08708 135 aaKnown RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 IGFBP1P08833 259 aaPredicted RBP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms