RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 SH3GL3Q99963 347 aa10.43□□□□□ -0.74
CUX1-210ENST00000497815 HCAR1Q9BXC0 346 aa10.43□□□□□ -0.74
CUX1-210ENST00000497815 C1QTNF6Q9BXI9 259 aa10.43□□□□□ -0.74
CUX1-210ENST00000497815 PRRG3Q9BZD7 231 aa10.43□□□□□ -0.74
CUX1-210ENST00000497815 NELFAQ9H3P2 528 aa10.43□□□□□ -0.74
CUX1-210ENST00000497815 C8orf4Q9NR00 106 aa10.43□□□□□ -0.74
CUX1-210ENST00000497815 FAM118AQ9NWS6 357 aa10.43□□□□□ -0.74
CUX1-210ENST00000497815 NDRG3Q9UGV2 375 aa10.43□□□□□ -0.74
CUX1-210ENST00000497815 B9D1Q9UPM9 204 aa10.43□□□□□ -0.74
CUX1-210ENST00000497815 GMPPBQ9Y5P6 360 aa10.43□□□□□ -0.74
CUX1-210ENST00000497815 INTS1Q8N201 2190 aaKnown RBP10.43□□□□□ -0.74
CUX1-210ENST00000497815 IGLV1-36A0A0B4J1U3 117 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 TLX2O43763 284 aaPredicted RBP10.42□□□□□ -0.74
CUX1-210ENST00000497815 MPZL1O95297 269 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 SPI1P17947 270 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 GGT2P36268 569 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 GUCA1AP43080 201 aaPredicted RBP10.42□□□□□ -0.74
CUX1-210ENST00000497815 KIR2DL3P43628 341 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 PTDSS1P48651 473 aaKnown RBP10.42□□□□□ -0.74
CUX1-210ENST00000497815 PCYT1AP49585 367 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 CDC42P60953 191 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 TAB1Q15750 504 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 KLHL12Q53G59 568 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 SP5Q6BEB4 398 aaPredicted RBP10.42□□□□□ -0.74
CUX1-210ENST00000497815 CXXC5Q7LFL8 322 aaKnown RBP10.42□□□□□ -0.74
CUX1-210ENST00000497815 BCDIN3DQ7Z5W3 292 aaKnown RBP10.42□□□□□ -0.74
CUX1-210ENST00000497815 WFDC8Q8IUA0 241 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 GLB1L2Q8IW92 636 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 SKA3Q8IX90 412 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 WDR31Q8NA23 367 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 BBS1Q8NFJ9 593 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 OR6K6Q8NGW6 343 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 OR2T4Q8NH00 348 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 ZNRF4Q8WWF5 429 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 RDH12Q96NR8 316 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 PSMG3-AS1Q96PY0 264 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 OR51V1Q9H2C8 321 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 EMC7Q9NPA0 242 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 HINT3Q9NQE9 182 aaKnown RBP10.42□□□□□ -0.74
CUX1-210ENST00000497815 SLC17A5Q9NRA2 495 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 IMPAD1Q9NX62 359 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 CRIM1Q9NZV1 1036 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 FKBP7Q9Y680 259 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 FLNCQ14315 2725 aa10.42□□□□□ -0.74
CUX1-210ENST00000497815 DIDO1Q9BTC0 2240 aaKnown RBP10.41□□□□□ -0.74
CUX1-210ENST00000497815 LOC100130705A0A1B0GUX0 176 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 TVP23AA6NH52 213 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 FARS2O95363 451 aaKnown RBP10.41□□□□□ -0.74
CUX1-210ENST00000497815 HLA-HP01893 362 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 HLA-DQA2P01906 255 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 SCG5P05408 212 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 THBDP07204 575 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 PATE4P0C8F1 98 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 OR8G3PP0DMU2 310 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 CD79AP11912 226 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 PPP3CBP16298 524 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 LAP3P28838 519 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 SLC25A1P53007 311 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 RPS7P62081 194 aaKnown RBP10.41□□□□□ -0.74
CUX1-210ENST00000497815 MRPS34P82930 218 aaKnown RBP10.41□□□□□ -0.74
CUX1-210ENST00000497815 PIGFQ07326 219 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 PPA1Q15181 289 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 MEP1BQ16820 701 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 TIMM23BQ5SRD1 257 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 UGT2A3Q6UWM9 527 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 ZBTB46Q86UZ6 589 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 DMRTC2Q8IXT2 367 aaPredicted RBP10.41□□□□□ -0.74
CUX1-210ENST00000497815 C17orf78Q8N4C9 275 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 TMEM163Q8TC26 289 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 HSD17B8Q92506 261 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 PTP4A1Q93096 173 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 UBE2FQ969M7 185 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 NABP1Q96AH0 204 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 MUCL1Q96DR8 90 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 HRASLS5Q96KN8 279 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 NMNAT2Q9BZQ4 307 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 RACGAP1Q9H0H5 632 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 OR10A4Q9H209 315 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 VCX3BQ9H321 246 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 SIAEQ9HAT2 523 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 POLE4Q9NR33 117 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 PLEKHB1Q9UF11 243 aaPredicted RBP10.41□□□□□ -0.74
CUX1-210ENST00000497815 NDRG4Q9ULP0 352 aaKnown RBP10.41□□□□□ -0.74
CUX1-210ENST00000497815 AMDHD2Q9Y303 409 aa10.41□□□□□ -0.74
CUX1-210ENST00000497815 ZNF503-AS2A6NEH8 195 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 CASKO14936 926 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 CLIC3O95833 236 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 IGFBP2P18065 325 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 NPR2P20594 1047 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 MSR1P21757 451 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 ZNF83P51522 516 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 AQP4P55087 323 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 GLO1Q04760 184 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 APOFQ13790 326 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 LYPD4Q6UWN0 246 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 B3GLCTQ6Y288 498 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 FOXL2NBQ6ZUU3 175 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 ZNF627Q7L945 461 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 SLC16A14Q7RTX9 510 aa10.4□□□□□ -0.74
CUX1-210ENST00000497815 P2RY8Q86VZ1 359 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms