RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 VWA2Q5GFL6 755 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 OR2L13Q8N349 312 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 CHST4Q8NCG5 386 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 OR7G2Q8NG99 324 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 OR2A12Q8NGT7 310 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 PHB2Q99623 299 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 TMED7Q9Y3B3 224 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 MED19A0JLT2 244 aaPredicted RBP11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 C4orf51C9J302 202 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 H7C1C5 153 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 FGF16O43320 207 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 TXNDC12O95881 172 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 TIMP2P16035 220 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 RCC1P18754 421 aaPredicted RBP11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 LCN6P62502 163 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 BHLHE23Q8NDY6 225 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 ZNF461Q8TAF7 563 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 C14orf144Q96I85 54 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 KIRREL1Q96J84 757 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 CASD1Q96PB1 797 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 KXD1Q9BQD3 176 aa11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 MRPS33Q9Y291 106 aaKnown RBP11.88□□□□□ -0.51
GAPVD1-220ENST00000497580 A0A087WV62 115 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 CDC40O60508 579 aaKnown RBP eCLIP11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 SLC25A4P12235 298 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 PSMB6P28072 239 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 RAB5CP51148 216 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 UNQ9370/PRO34162Q6UXP9 181 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 UNQ6494/PRO21346Q6UXR6 183 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.87□□□□□ -0.512e-9■■□□□ 12.3
GAPVD1-220ENST00000497580 RNASE11Q8TAA1 199 aaKnown RBP11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 NUDCD2Q8WVJ2 157 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 GTF3AQ92664 365 aaKnown RBP11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 FAM3DQ96BQ1 224 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 RRNAD1Q96FB5 475 aaKnown RBP11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 MARS2Q96GW9 593 aaKnown RBP11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 INSM2Q96T92 566 aaPredicted RBP11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 EIF5A2Q9GZV4 153 aaKnown RBP11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 SPACA1Q9HBV2 294 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 LPAR3Q9UBY5 353 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 VSIG4Q9Y279 399 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 Q9Y3F1 56 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 MMP24Q9Y5R2 645 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 MYO15AQ9UKN7 3530 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 A0A0A6YYD5 115 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 VEGFDO43915 354 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 METAP1P53582 386 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 ELAVL2Q12926 359 aaKnown RBP11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 ANKRD16Q6P6B7 361 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 C17orf99Q6UX52 265 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 BIVMQ86UB2 503 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 ACBD4Q8NC06 268 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 VN1R2Q8NFZ6 395 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 AMDHD2Q9Y303 409 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 PCYT1BQ9Y5K3 369 aaPredicted RBP11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 CCL16O15467 120 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 CD79AP11912 226 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 EEF1A1P68104 462 aaKnown RBP11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 ZNF616Q08AN1 781 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 EIPR1Q53HC9 387 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 EEF1A1P5Q5VTE0 462 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 RPL13AP3Q6NVV1 102 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 IL34Q6ZMJ4 242 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 JSRP1Q96MG2 331 aaPredicted RBP11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 CMKLR1Q99788 373 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 C19orf43Q9BQ61 176 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 RAB33BQ9H082 229 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 UNKLQ9H9P5 680 aaKnown RBP11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 CGGBP1Q9UFW8 167 aaPredicted RBP11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 VWA8A3KMH1 1905 aa11.87□□□□□ -0.51
GAPVD1-220ENST00000497580 DCDC2BA2VCK2 349 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 ITGA5P08648 1049 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 CTSAP10619 480 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 MAOAP21397 527 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 CAV2P51636 162 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 BTN3A2P78410 334 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 IRF4Q15306 451 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 SLC9A3R2Q15599 337 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 RAB11BQ15907 218 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 MST1LQ2TV78 715 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 RNASE10Q5GAN6 216 aaKnown RBP11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 C10orf91Q5T1B1 145 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 LEG1Q6P5S2 330 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 ZNF584Q8IVC4 421 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 COX18Q8N8Q8 333 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 POMGNT2Q8NAT1 580 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 OR5T3Q8NGG3 340 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 OR6N2Q8NGY6 317 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 RXFP3Q9NSD7 469 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 DCAF16Q9NXF7 216 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 MAFFQ9ULX9 164 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 SLC45A1Q9Y2W3 748 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 SZT2Q5T011 3432 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 GRXCR1A8MXD5 290 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 BLOC1S5-TXNDC5H3BN57 136 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 SRPX2O60687 465 aaPredicted RBP11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 SLC34A2O95436 690 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 ERCC1P07992 297 aaPredicted RBP11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 AGAP20933 346 aa11.86□□□□□ -0.51
GAPVD1-220ENST00000497580 HIST1H1TP22492 207 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms