RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 PIK3IP1Q96FE7 263 aa2.91□□□□□ -1.94
VPS36-206ENST00000497149 FOPNLQ96NB1 174 aa2.91□□□□□ -1.94
VPS36-206ENST00000497149 P2RX4Q99571 388 aa2.91□□□□□ -1.94
VPS36-206ENST00000497149 MRPL37Q9BZE1 423 aaKnown RBP2.91□□□□□ -1.94
VPS36-206ENST00000497149 CLSTN2Q9H4D0 955 aa2.91□□□□□ -1.94
VPS36-206ENST00000497149 SLC40A1Q9NP59 571 aa2.91□□□□□ -1.94
VPS36-206ENST00000497149 MN1Q10571 1320 aaPredicted RBP2.91□□□□□ -1.94
VPS36-206ENST00000497149 CNTNAP1P78357 1384 aa2.9□□□□□ -1.94
VPS36-206ENST00000497149 MRPS12O15235 138 aaKnown RBP2.9□□□□□ -1.95
VPS36-206ENST00000497149 AIREO43918 545 aa2.9□□□□□ -1.95
VPS36-206ENST00000497149 DFNA5O60443 496 aa2.9□□□□□ -1.95
VPS36-206ENST00000497149 ZNF324O75467 553 aaPredicted RBP2.9□□□□□ -1.95
VPS36-206ENST00000497149 MED6O75586 246 aa2.9□□□□□ -1.95
VPS36-206ENST00000497149 HRH1P35367 487 aa2.9□□□□□ -1.95
VPS36-206ENST00000497149 SSR4P51571 173 aa2.9□□□□□ -1.95
VPS36-206ENST00000497149 CCNHP51946 323 aaPredicted RBP2.9□□□□□ -1.95
VPS36-206ENST00000497149 NUTF2P61970 127 aaKnown RBP2.9□□□□□ -1.95
VPS36-206ENST00000497149 YWHAGP61981 247 aaKnown RBP eCLIP2.9□□□□□ -1.95
VPS36-206ENST00000497149 CLINT1Q14677 625 aa2.9□□□□□ -1.95
VPS36-206ENST00000497149 CDH26Q8IXH8 852 aa2.9□□□□□ -1.95
VPS36-206ENST00000497149 MYOCDQ8IZQ8 938 aa2.9□□□□□ -1.95
VPS36-206ENST00000497149 PDIK1LQ8N165 341 aa2.9□□□□□ -1.95
VPS36-206ENST00000497149 LIX1Q8N485 282 aa2.9□□□□□ -1.95
VPS36-206ENST00000497149 LKAAEAR1Q8TD35 194 aa2.9□□□□□ -1.95
VPS36-206ENST00000497149 BMFQ96LC9 184 aa2.9□□□□□ -1.95
VPS36-206ENST00000497149 ATP5SQ99766 215 aa2.9□□□□□ -1.95
VPS36-206ENST00000497149 CCDC94Q9BW85 323 aaPredicted RBP2.9□□□□□ -1.95
VPS36-206ENST00000497149 ILKAPQ9H0C8 392 aaPredicted RBP2.9□□□□□ -1.95
VPS36-206ENST00000497149 STMN4Q9H169 189 aaPredicted RBP2.9□□□□□ -1.95
VPS36-206ENST00000497149 NMRK1Q9NWW6 199 aa2.9□□□□□ -1.95
VPS36-206ENST00000497149 TMED5Q9Y3A6 229 aa2.9□□□□□ -1.95
VPS36-206ENST00000497149 MRPS18BQ9Y676 258 aaKnown RBP2.9□□□□□ -1.95
VPS36-206ENST00000497149 LINC00854A0A1B0GVQ3 168 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 HEATR9A2RTY3 570 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 FAM47DPA6NHR8 397 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 ZNF716A6NP11 495 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 F6UB75 175 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 L7N2F9 121 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 CLIC3O95833 236 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 GNAO1P09471 354 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 CCDC172P0C7W6 258 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 TLX1NBP0CAT3 122 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 ZNF735P0CB33 412 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 CALM1P0DP23 149 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 CALM2P0DP24 149 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 CALM3P0DP25 149 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 GZMAP12544 262 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 ZNF823P16415 610 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 CYB561P49447 251 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 LINC00315P59091 139 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 CUL2Q13617 745 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 POU2AF1Q16633 256 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 HES5Q5TA89 166 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 KHDRBS2Q5VWX1 349 aaKnown RBP2.89□□□□□ -1.95
VPS36-206ENST00000497149 SASS6Q6UVJ0 657 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 TEX43Q6ZNM6 134 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 Q6ZSR3 168 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 FAM86B1Q8N7N1 296 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 OR10G4Q8NGN3 311 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 OR10R2Q8NGX6 335 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 OR4S2Q8NH73 311 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 RASD2Q96D21 266 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 NOX3Q9HBY0 568 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 OR12D3Q9UGF7 316 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 LSM7Q9UK45 103 aaKnown RBP2.89□□□□□ -1.95
VPS36-206ENST00000497149 ING4Q9UNL4 249 aa2.89□□□□□ -1.95
VPS36-206ENST00000497149 USP47Q96K76 1375 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 IGHV3-66A0A0C4DH42 116 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 CTAGE15A4D2H0 777 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 GOLGA8OA6NCC3 632 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 SPECC1L-ADORA2AF8WAN1 911 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 GOLGA8NF8WBI6 632 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 EEDO75530 441 aaKnown RBP2.88□□□□□ -1.95
VPS36-206ENST00000497149 CIB2O75838 187 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 TPM3P06753 285 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 TPM1P09493 284 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 PRPS2P11908 318 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 CDKN2BP42772 138 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 NSG1P42857 185 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 ATP5OP48047 213 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 ETV1P50549 477 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 ACTA2P62736 377 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 ACTG2P63267 376 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 ACTC1P68032 377 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 CCNA1P78396 465 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 SLAQ13239 276 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 CCNJQ5T5M9 372 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 ANKRD22Q5VYY1 191 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 SPECC1LQ69YQ0 1117 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 ANKRD26P1Q6NSI1 321 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 ZYG11AQ6WRX3 759 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 FAM92BQ6ZTR7 304 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 HDDC2Q7Z4H3 204 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 MTERF4Q7Z6M4 381 aaKnown RBP2.88□□□□□ -1.95
VPS36-206ENST00000497149 CTAGE6Q86UF2 777 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 CYB561D1Q8N8Q1 229 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 C15orf56Q8N910 161 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 FBXL13Q8NEE6 735 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 OR56B2PQ8NGI1 322 aa2.88□□□□□ -1.95
VPS36-206ENST00000497149 SUN5Q8TC36 379 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms