RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 ARR3P36575 388 aa12.44□□□□□ -0.42
CXCL12-208ENST00000496375 CAPZA2P47755 286 aa12.44□□□□□ -0.42
CXCL12-208ENST00000496375 SPIBQ01892 262 aa12.44□□□□□ -0.42
CXCL12-208ENST00000496375 NPRL3Q12980 569 aa12.44□□□□□ -0.42
CXCL12-208ENST00000496375 TAF11Q15544 211 aa12.44□□□□□ -0.42
CXCL12-208ENST00000496375 FGD3Q5JSP0 725 aa12.44□□□□□ -0.42
CXCL12-208ENST00000496375 FAM166AQ6J272 317 aa12.44□□□□□ -0.42
CXCL12-208ENST00000496375 IL17RELQ6ZVW7 336 aa12.44□□□□□ -0.42
CXCL12-208ENST00000496375 MDP1Q86V88 176 aa12.44□□□□□ -0.42
CXCL12-208ENST00000496375 LINC00471Q8N535 108 aa12.44□□□□□ -0.42
CXCL12-208ENST00000496375 LRRC75AQ8NAA5 344 aa12.44□□□□□ -0.42
CXCL12-208ENST00000496375 OR4C15Q8NGM1 316 aa12.44□□□□□ -0.42
CXCL12-208ENST00000496375 OR6X1Q8NH79 312 aa12.44□□□□□ -0.42
CXCL12-208ENST00000496375 CANT1Q8WVQ1 401 aa12.44□□□□□ -0.42
CXCL12-208ENST00000496375 BPESC1Q9GZL8 116 aa12.44□□□□□ -0.42
CXCL12-208ENST00000496375 RAB1BQ9H0U4 201 aa12.44□□□□□ -0.42
CXCL12-208ENST00000496375 ZNF442Q9H7R0 627 aa12.44□□□□□ -0.42
CXCL12-208ENST00000496375 KRCC1Q9NPI7 259 aaPredicted RBP12.44□□□□□ -0.42
CXCL12-208ENST00000496375 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.43□□□□□ -0.42
CXCL12-208ENST00000496375 IGHV2OR16-5A0A0B4J2B6 119 aa12.43□□□□□ -0.42
CXCL12-208ENST00000496375 VSTM5A8MXK1 200 aa12.43□□□□□ -0.42
CXCL12-208ENST00000496375 ZNF99A8MXY4 864 aaPredicted RBP12.43□□□□□ -0.42
CXCL12-208ENST00000496375 EFCAB9A8MZ26 197 aa12.43□□□□□ -0.42
CXCL12-208ENST00000496375 M0R3G1 203 aa12.43□□□□□ -0.42
CXCL12-208ENST00000496375 SRD5A1P18405 259 aa12.43□□□□□ -0.42
CXCL12-208ENST00000496375 NPR2P20594 1047 aa12.43□□□□□ -0.42
CXCL12-208ENST00000496375 AHCYP23526 432 aa12.43□□□□□ -0.42
CXCL12-208ENST00000496375 PHYHD1Q5SRE7 291 aa12.43□□□□□ -0.42
CXCL12-208ENST00000496375 CARD17Q5XLA6 110 aa12.43□□□□□ -0.42
CXCL12-208ENST00000496375 OR2T5Q6IEZ7 315 aa12.43□□□□□ -0.42
CXCL12-208ENST00000496375 ZNF770Q6IQ21 691 aaPredicted RBP12.43□□□□□ -0.42
CXCL12-208ENST00000496375 SLC35D2Q76EJ3 337 aa12.43□□□□□ -0.42
CXCL12-208ENST00000496375 RRM2BQ7LG56 351 aa12.43□□□□□ -0.42
CXCL12-208ENST00000496375 WDFY1Q8IWB7 410 aa12.43□□□□□ -0.42
CXCL12-208ENST00000496375 C20orf196Q8IYI0 205 aa12.43□□□□□ -0.42
CXCL12-208ENST00000496375 CDK20Q8IZL9 346 aa12.43□□□□□ -0.42
CXCL12-208ENST00000496375 SVOPLQ8N434 492 aa12.43□□□□□ -0.42
CXCL12-208ENST00000496375 ZNF540Q8NDQ6 660 aa12.43□□□□□ -0.42
CXCL12-208ENST00000496375 OR2T29Q8NH02 315 aa12.43□□□□□ -0.42
CXCL12-208ENST00000496375 UTP4Q969X6 686 aaKnown RBP12.43□□□□□ -0.42
CXCL12-208ENST00000496375 DUS3LQ96G46 650 aaKnown RBP12.43□□□□□ -0.42
CXCL12-208ENST00000496375 TXNDC15Q96J42 360 aa12.43□□□□□ -0.42
CXCL12-208ENST00000496375 GPX7Q96SL4 187 aaPredicted RBP12.43□□□□□ -0.42
CXCL12-208ENST00000496375 MED29Q9NX70 200 aa12.43□□□□□ -0.42
CXCL12-208ENST00000496375 FBXO9Q9UK97 447 aaPredicted RBP12.43□□□□□ -0.42
CXCL12-208ENST00000496375 C11orf98E9PRG8 122 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 BLOC1S5-TXNDC5H3BN57 136 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 RNF13O43567 381 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 PTP4A3O75365 173 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 ERCC1P07992 297 aaPredicted RBP12.42□□□□□ -0.42
CXCL12-208ENST00000496375 SAGP10523 405 aaPredicted RBP12.42□□□□□ -0.42
CXCL12-208ENST00000496375 IFNGR1P15260 489 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 ZNF23P17027 643 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 FPR3P25089 353 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 AQP2P41181 271 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 GPR4P46093 362 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 GSSP48637 474 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 DAP3P51398 398 aaKnown RBP12.42□□□□□ -0.42
CXCL12-208ENST00000496375 ZNF133P52736 654 aaPredicted RBP12.42□□□□□ -0.42
CXCL12-208ENST00000496375 HIST3H3Q16695 136 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 FAM120AOSQ5T036 256 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 ARMC4Q5T2S8 1044 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 C1orf94Q6P1W5 598 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 ZNF627Q7L945 461 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 HDDC2Q7Z4H3 204 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 ZER1Q7Z7L7 766 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 OAFQ86UD1 273 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 CCDC36Q8IYA8 594 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 ZCCHC24Q8N2G6 241 aaKnown RBP12.42□□□□□ -0.42
CXCL12-208ENST00000496375 OR52J3Q8NH60 311 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 MOSPD2Q8NHP6 518 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 ASB10Q8WXI3 467 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 TMEM54Q969K7 222 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 SLCO4A1Q96BD0 722 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 SLC25A44Q96H78 314 aaPredicted RBP12.42□□□□□ -0.42
CXCL12-208ENST00000496375 FAM46AQ96IP4 442 aaKnown RBP12.42□□□□□ -0.42
CXCL12-208ENST00000496375 RAB3IPQ96QF0 476 aaPredicted RBP12.42□□□□□ -0.42
CXCL12-208ENST00000496375 DOK1Q99704 481 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 EMC6Q9BV81 110 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 CHID1Q9BWS9 393 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 MRPL13Q9BYD1 178 aaKnown RBP12.42□□□□□ -0.42
CXCL12-208ENST00000496375 NOX3Q9HBY0 568 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 INIPQ9NRY2 104 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 STX18Q9P2W9 335 aaKnown RBP12.42□□□□□ -0.42
CXCL12-208ENST00000496375 SIGLEC7Q9Y286 467 aa12.42□□□□□ -0.42
CXCL12-208ENST00000496375 TMEM129A0AVI4 362 aa12.41□□□□□ -0.42
CXCL12-208ENST00000496375 LRP5LA4QPB2 252 aa12.41□□□□□ -0.42
CXCL12-208ENST00000496375 ARRDC5A6NEK1 342 aa12.41□□□□□ -0.42
CXCL12-208ENST00000496375 TNFRSF11BO00300 401 aa12.41□□□□□ -0.42
CXCL12-208ENST00000496375 TGFAP01135 160 aa12.41□□□□□ -0.42
CXCL12-208ENST00000496375 HLA-HP01893 362 aa12.41□□□□□ -0.42
CXCL12-208ENST00000496375 PGA4P0DJD7 388 aa12.41□□□□□ -0.42
CXCL12-208ENST00000496375 PGA3P0DJD8 388 aa12.41□□□□□ -0.42
CXCL12-208ENST00000496375 CD79AP11912 226 aa12.41□□□□□ -0.42
CXCL12-208ENST00000496375 DAOP14920 347 aa12.41□□□□□ -0.42
CXCL12-208ENST00000496375 ZNF26P17031 533 aaPredicted RBP12.41□□□□□ -0.42
CXCL12-208ENST00000496375 THBS2P35442 1172 aa12.41□□□□□ -0.42
CXCL12-208ENST00000496375 IFNGR2P38484 337 aa12.41□□□□□ -0.42
CXCL12-208ENST00000496375 FXYD6P3P58550 94 aa12.41□□□□□ -0.42
CXCL12-208ENST00000496375 SNTB2Q13425 540 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms