RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 ZCCHC3Q9NUD5 404 aaKnown RBP8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 GAR1Q9NY12 217 aaKnown RBP8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 ETAA1Q9NY74 926 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 NKX1-2Q9UD57 310 aaPredicted RBP8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 X6R8D5 127 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 IGLV3-9A0A075B6K5 115 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 TMED7-TICAM2A0A0A6YYA0 188 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 IGHV2-70DA0A0C4DH43 119 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 RPL36A-HNRNPH2H7BZ11 118 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 PPP6CO00743 305 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 ZNF208O43345 1280 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 KLHL2O95198 593 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 IGHV2-70P01814 119 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 IGHV4-59P01825 116 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 HMGN2P05204 90 aaKnown RBP8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 RPS17P08708 135 aaKnown RBP8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 OR8G3PP0DMU2 310 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 ZNF14P17017 642 aaPredicted RBP8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 RYKP34925 604 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 ZNF81P51508 661 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 CDH13P55290 713 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 PCBP3P57721 371 aaKnown RBP8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 GNB2P62879 340 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 GLO1Q04760 184 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 PIGFQ07326 219 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 DCTN2Q13561 401 aaKnown RBP8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 PDE7AQ13946 482 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 OR7A5Q15622 319 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 SMU1Q2TAY7 513 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 CEACAM16Q2WEN9 425 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 TMEM155Q4W5P6 130 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 CCDC121Q6ZUS5 278 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 CREB3L2Q70SY1 520 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 RPS27LQ71UM5 84 aaKnown RBP8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 MEPCEQ7L2J0 689 aaKnown RBP8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 ZNF572Q7Z3I7 529 aaPredicted RBP8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 POU5F2Q8N7G0 328 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 FOXRED1Q96CU9 486 aaPredicted RBP8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 THOC1Q96FV9 657 aaKnown RBP8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 TMEM237Q96Q45 408 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 DCLRE1CQ96SD1 692 aaKnown RBP8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 TBX15Q96SF7 602 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 ATP6V0BQ99437 205 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 SSBP3Q9BWW4 388 aaPredicted RBP8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 PCDHAC1Q9H158 963 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 FBXL3Q9UKT7 428 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 FAF1Q9UNN5 650 aaPredicted RBP8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 TMED7Q9Y3B3 224 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 POLR3HQ9Y535 204 aaPredicted RBP8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 SAR1BQ9Y6B6 198 aa8.02□□□□□ -1.13
SMARCAL1-213ENST00000496037 WI2-2373I1.2A0A1W2PRP0 233 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 BTBD17A6NE02 478 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 SAC3D1A6NKF1 404 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 ZNF99A8MXY4 864 aaPredicted RBP8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 PGRMC1O00264 195 aaKnown RBP8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 ADAM20O43506 726 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 SPRY3O43610 288 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 SCN2BO60939 215 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 SLC43A1O75387 559 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 VAMP5O95183 116 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 ABHD16AO95870 558 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 LCKP06239 509 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 C2P06681 752 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 KRT16P08779 473 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 NHLRC4P0CG21 123 aaPredicted RBP8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 OR12D1P0DN82 309 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 UROSP10746 265 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 SSTR1P30872 391 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 RBBP4Q09028 425 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 CEACAM7Q14002 265 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 NSUN5P1Q3KNT7 163 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 MROH9Q5TGP6 573 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 ANKRD26P1Q6NSI1 321 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 SLC2A7Q6PXP3 512 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 DPP10Q8N608 796 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 ICA1LQ8NDH6 482 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 BHLHE22Q8NFJ8 381 aaPredicted RBP8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 OR4F17Q8NGA8 305 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 MUC7Q8TAX7 377 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 ZNF483Q8TF39 744 aaPredicted RBP8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 C11orf40Q8WZ69 217 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 CFHR4Q92496 578 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 MS4A14Q96JA4 679 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 OR4F4Q96R69 305 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 SPXQ9BT56 116 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 TAPBPLQ9BX59 468 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 TEX12Q9BXU0 123 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 MRPL46Q9H2W6 279 aaKnown RBP8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 OR51B6Q9H340 312 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 DPAGT1Q9H3H5 408 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 GPR35Q9HC97 309 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 SIRT5Q9NXA8 310 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 B3GNT2Q9NY97 397 aa8.01□□□□□ -1.13
SMARCAL1-213ENST00000496037 TCRBV9S1A1TA0A576 114 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 PLSCR5A0PG75 271 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 SHISA3A0PJX4 238 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 TMEM72A0PK05 275 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 LIPT2A6NK58 231 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 FAM159BA6NKW6 160 aa8□□□□□ -1.13
SMARCAL1-213ENST00000496037 H0YAE9 185 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms