RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, human

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS52-222	ENST00000495981	SMIM18	P0DKX4	95 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	ARSB	P15848	533 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	TSPAN8	P19075	237 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	PSMB1	P20618	241 aa	Known RBP	3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	COX5A	P20674	150 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	SHC1	P29353	583 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	IL12B	P29460	328 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	MAP3K8	P41279	467 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	MAGEA4	P43358	317 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	MAGEB1	P43366	347 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	SLC9A3	P48764	834 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	CCNG1	P51959	295 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	ATP5J2	P56134	94 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	GNG11	P61952	73 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	TRA2B	P62995	288 aa	Known RBP	3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	EEF1A1	P68104	462 aa	Known RBP	3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	ZNF763	Q0D2J5	394 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	IFT88	Q13099	833 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	CALCOCO2	Q13137	446 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	VEZF1	Q14119	521 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	ZNF239	Q16600	458 aa	Known RBP	3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	CLEC12B	Q2HXU8	276 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	FAM83E	Q2M2I3	478 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	PLPPR5	Q32ZL2	321 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	HSP90B2P	Q58FF3	399 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	SYT14P1	Q58G82	188 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	CCNYL2	Q5T2Q4	361 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	EEF1A1P5	Q5VTE0	462 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	ADAM5	Q6NVV9	412 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	TMEM107	Q6UX40	140 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	TFAP2E	Q6VUC0	442 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	PAGE2	Q7Z2X7	111 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	P4HA3	Q7Z4N8	544 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	EXOC3L1	Q86VI1	746 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	ELMOD2	Q8IZ81	293 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	GABRG1	Q8N1C3	465 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	ARHGAP24	Q8N264	748 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	MNS1	Q8NEH6	495 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	SPATA4	Q8NEY3	305 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	KBTBD8	Q8NFY9	601 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	OR4K17	Q8NGC6	315 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	OR10D3	Q8NH80	312 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	SGMS2	Q8NHU3	365 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	THAP6	Q8TBB0	222 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	ABHD3	Q8WU67	409 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	SSMEM1	Q8WWF3	244 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	NEUROG1	Q92886	237 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	EXOSC8	Q96B26	276 aa	Known RBP	3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	S100PBP	Q96BU1	408 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	PHF21B	Q96EK2	531 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	PGM2	Q96G03	612 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	FAIM2	Q9BWQ8	316 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	BEX2	Q9BXY8	128 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	EBPL	Q9BY08	206 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	SRXN1	Q9BYN0	137 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	SHCBP1L	Q9BZQ2	653 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	ELOVL6	Q9H5J4	265 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	COQ10B	Q9H8M1	238 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981		Q9H8V8	135 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	RAB9B	Q9NP90	201 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	MED4	Q9NPJ6	270 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	CLEC4A	Q9UMR7	237 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	ZNF337	Q9Y3M9	751 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	TENM2	Q9NT68	2774 aa		3.68	□□□□□ -1.82
VPS52-222	ENST00000495981	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	GOLGA8Q	A0A0J9YX86	632 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981		A0A1W2PRB8	838 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	GOLGA8O	A6NCC3	632 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	GOLGA8N	F8WBI6	632 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	TMEM178B	H3BS89	294 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	GOLGA8R	I6L899	631 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	UPK1A	O00322	258 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	UBFD1	O14562	309 aa	Known RBP	3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	CASK	O14936	926 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	REM1	O75628	298 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	OR4F21	O95013	312 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	VENTX	O95231	258 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	UTS2	O95399	124 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	PTBP3	O95758	552 aa	Known RBP	3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	SAG	P10523	405 aa	Predicted RBP	3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	ITGA2	P17301	1181 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	IGFBP5	P24593	272 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	EDNRA	P25101	427 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	GCA	P28676	217 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	ACVR1B	P36896	505 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	RPL3	P39023	403 aa	Known RBP	3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	OR3A1	P47881	315 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	CDX1	P47902	265 aa	Predicted RBP	3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	PLTP	P55058	493 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	FOXA1	P55317	472 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	RPS4X	P62701	263 aa	Known RBP	3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	FOXF1	Q12946	379 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	TSC22D1	Q15714	1073 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	CD226	Q15762	336 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	NPTX1	Q15818	432 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	ETFDH	Q16134	617 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	EXOC3L2	Q2M3D2	409 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	PGGHG	Q32M88	737 aa		3.67	□□□□□ -1.82
VPS52-222	ENST00000495981	UNC50	Q53HI1	259 aa		3.67	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 58 ms