RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 FHL1Q13642 323 aa20.83■□□□□ 0.93
HLA-C-209ENST00000495835 GGTLC2Q14390 218 aa20.83■□□□□ 0.93
HLA-C-209ENST00000495835 CARTPTQ16568 116 aa20.83■□□□□ 0.93
HLA-C-209ENST00000495835 MSMPQ1L6U9 139 aa20.83■□□□□ 0.93
HLA-C-209ENST00000495835 CHRFAM7AQ494W8 412 aa20.83■□□□□ 0.93
HLA-C-209ENST00000495835 FAM27BQ5VT28 67 aa20.83■□□□□ 0.93
HLA-C-209ENST00000495835 GLYATQ6IB77 296 aa20.83■□□□□ 0.93
HLA-C-209ENST00000495835 RGS7BPQ6MZT1 257 aaPredicted RBP20.83■□□□□ 0.93
HLA-C-209ENST00000495835 ZCCHC24Q8N2G6 241 aaKnown RBP20.83■□□□□ 0.93
HLA-C-209ENST00000495835 NDEL1Q9GZM8 345 aa20.83■□□□□ 0.93
HLA-C-209ENST00000495835 NMNAT1Q9HAN9 279 aaPredicted RBP20.83■□□□□ 0.93
HLA-C-209ENST00000495835 SAMD4AQ9UPU9 718 aaKnown RBP20.83■□□□□ 0.93
HLA-C-209ENST00000495835 FAM32AQ9Y421 112 aaKnown RBP20.83■□□□□ 0.93
HLA-C-209ENST00000495835 UGT2A1Q9Y4X1 527 aa20.83■□□□□ 0.93
HLA-C-209ENST00000495835 A0A1W2PRQ8 180 aa20.82■□□□□ 0.92
HLA-C-209ENST00000495835 AHCYL1O43865 530 aa20.82■□□□□ 0.92
HLA-C-209ENST00000495835 SLC2A10O95528 541 aa20.82■□□□□ 0.92
HLA-C-209ENST00000495835 IFNA2P01563 188 aa20.82■□□□□ 0.92
HLA-C-209ENST00000495835 APEHP13798 732 aaKnown RBP20.82■□□□□ 0.92
HLA-C-209ENST00000495835 RHCEP18577 417 aa20.82■□□□□ 0.92
HLA-C-209ENST00000495835 DRD4P21917 467 aa20.82■□□□□ 0.92
HLA-C-209ENST00000495835 DGCR6Q14129 220 aa20.82■□□□□ 0.92
HLA-C-209ENST00000495835 IQCCQ4KMZ1 466 aa20.82■□□□□ 0.92
HLA-C-209ENST00000495835 C1orf174Q8IYL3 243 aa20.82■□□□□ 0.92
HLA-C-209ENST00000495835 LRRC18Q8N456 261 aa20.82■□□□□ 0.92
HLA-C-209ENST00000495835 ARIH2OSQ8N7S6 290 aa20.82■□□□□ 0.92
HLA-C-209ENST00000495835 OR51A7Q8NH64 312 aa20.82■□□□□ 0.92
HLA-C-209ENST00000495835 ZNF519Q8TB69 540 aa20.82■□□□□ 0.92
HLA-C-209ENST00000495835 NABP1Q96AH0 204 aa20.82■□□□□ 0.92
HLA-C-209ENST00000495835 WACQ9BTA9 647 aa20.82■□□□□ 0.92
HLA-C-209ENST00000495835 BPESC1Q9GZL8 116 aa20.82■□□□□ 0.92
HLA-C-209ENST00000495835 GORASP2Q9H8Y8 452 aa20.82■□□□□ 0.92
HLA-C-209ENST00000495835 CCNB1IP1Q9NPC3 277 aa20.82■□□□□ 0.92
HLA-C-209ENST00000495835 DCAF13Q9NV06 445 aaKnown RBP20.82■□□□□ 0.92
HLA-C-209ENST00000495835 LPAR3Q9UBY5 353 aa20.82■□□□□ 0.92
HLA-C-209ENST00000495835 TACSTD2P09758 323 aa20.81■□□□□ 0.92
HLA-C-209ENST00000495835 ZNF250P15622 560 aa20.81■□□□□ 0.92
HLA-C-209ENST00000495835 FUT4P22083 530 aa20.81■□□□□ 0.92
HLA-C-209ENST00000495835 APLNRP35414 380 aa20.81■□□□□ 0.92
HLA-C-209ENST00000495835 UCP2P55851 309 aa20.81■□□□□ 0.92
HLA-C-209ENST00000495835 HSF2Q03933 536 aa20.81■□□□□ 0.92
HLA-C-209ENST00000495835 MOGQ16653 247 aa20.81■□□□□ 0.92
HLA-C-209ENST00000495835 ZBED5Q49AG3 693 aa20.81■□□□□ 0.92
HLA-C-209ENST00000495835 PODNL1Q6PEZ8 512 aa20.81■□□□□ 0.92
HLA-C-209ENST00000495835 UGT2A3Q6UWM9 527 aa20.81■□□□□ 0.92
HLA-C-209ENST00000495835 UNQ6126/PRO20091Q6UXV3 157 aa20.81■□□□□ 0.92
HLA-C-209ENST00000495835 FOXL2NBQ6ZUU3 175 aa20.81■□□□□ 0.92
HLA-C-209ENST00000495835 SLC7A13Q8TCU3 470 aa20.81■□□□□ 0.92
HLA-C-209ENST00000495835 C11orf40Q8WZ69 217 aa20.81■□□□□ 0.92
HLA-C-209ENST00000495835 IGLV3-9A0A075B6K5 115 aa20.8■□□□□ 0.92
HLA-C-209ENST00000495835 TRAV27A0A087WT01 109 aa20.8■□□□□ 0.92
HLA-C-209ENST00000495835 IGHV4-61A0A0C4DH41 118 aa20.8■□□□□ 0.92
HLA-C-209ENST00000495835 KIAA1324LA8MWY0 1029 aaPredicted RBP20.8■□□□□ 0.92
HLA-C-209ENST00000495835 CST2P09228 141 aa20.8■□□□□ 0.92
HLA-C-209ENST00000495835 NCK1P16333 377 aa20.8■□□□□ 0.92
HLA-C-209ENST00000495835 PCBD1P61457 104 aa20.8■□□□□ 0.92
HLA-C-209ENST00000495835 MRPS11P82912 194 aaKnown RBP20.8■□□□□ 0.92
HLA-C-209ENST00000495835 TOP3AQ13472 1001 aaPredicted RBP20.8■□□□□ 0.92
HLA-C-209ENST00000495835 RIN1Q13671 783 aa20.8■□□□□ 0.92
HLA-C-209ENST00000495835 SGCAQ16586 387 aa20.8■□□□□ 0.92
HLA-C-209ENST00000495835 TSEN54Q7Z6J9 526 aaKnown RBP20.8■□□□□ 0.92
HLA-C-209ENST00000495835 SYT9Q86SS6 491 aa20.8■□□□□ 0.92
HLA-C-209ENST00000495835 ALDH16A1Q8IZ83 802 aa20.8■□□□□ 0.92
HLA-C-209ENST00000495835 HPS1Q92902 700 aa20.8■□□□□ 0.92
HLA-C-209ENST00000495835 TSPAN32Q96QS1 320 aa20.8■□□□□ 0.92
HLA-C-209ENST00000495835 SYT3Q9BQG1 590 aa20.8■□□□□ 0.92
HLA-C-209ENST00000495835 SLCO1C1Q9NYB5 712 aa20.8■□□□□ 0.92
HLA-C-209ENST00000495835 DUSP13Q9UII6 198 aa20.8■□□□□ 0.92
HLA-C-209ENST00000495835 IGKV1D-43A0A0B4J1Z2 117 aa20.79■□□□□ 0.92
HLA-C-209ENST00000495835 H1F0P07305 194 aaKnown RBP20.79■□□□□ 0.92
HLA-C-209ENST00000495835 CD14P08571 375 aa20.79■□□□□ 0.92
HLA-C-209ENST00000495835 ITGA2P17301 1181 aa20.79■□□□□ 0.92
HLA-C-209ENST00000495835 CDAP32320 146 aa20.79■□□□□ 0.92
HLA-C-209ENST00000495835 CHN2P52757 468 aa20.79■□□□□ 0.92
HLA-C-209ENST00000495835 FMODQ06828 376 aa20.79■□□□□ 0.92
HLA-C-209ENST00000495835 PABPC1L2AQ5JQF8 200 aa20.79■□□□□ 0.92
HLA-C-209ENST00000495835 FAM166AQ6J272 317 aa20.79■□□□□ 0.92
HLA-C-209ENST00000495835 TBPL2Q6SJ96 375 aa20.79■□□□□ 0.92
HLA-C-209ENST00000495835 LRP11Q86VZ4 500 aa20.79■□□□□ 0.92
HLA-C-209ENST00000495835 PAQR4Q8N4S7 273 aaPredicted RBP20.79■□□□□ 0.92
HLA-C-209ENST00000495835 SYNPRQ8TBG9 265 aa20.79■□□□□ 0.92
HLA-C-209ENST00000495835 NSMAFQ92636 917 aa20.79■□□□□ 0.92
HLA-C-209ENST00000495835 C7orf34Q96L11 122 aa20.79■□□□□ 0.92
HLA-C-209ENST00000495835 FAM107BQ9H098 131 aa20.79■□□□□ 0.92
HLA-C-209ENST00000495835 KRCC1Q9NPI7 259 aaPredicted RBP20.79■□□□□ 0.92
HLA-C-209ENST00000495835 ADA2Q9NZK5 511 aa20.79■□□□□ 0.92
HLA-C-209ENST00000495835 NDUFAF4Q9P032 175 aa20.79■□□□□ 0.92
HLA-C-209ENST00000495835 GRHPRQ9UBQ7 328 aa20.79■□□□□ 0.92
HLA-C-209ENST00000495835 EGFL7Q9UHF1 273 aa20.79■□□□□ 0.92
HLA-C-209ENST00000495835 RTTNQ86VV8 2226 aa20.79■□□□□ 0.92
HLA-C-209ENST00000495835 LMX1BO60663 402 aa20.78■□□□□ 0.92
HLA-C-209ENST00000495835 FAM157CP0CG43 387 aa20.78■□□□□ 0.92
HLA-C-209ENST00000495835 HSD17B1P14061 328 aa20.78■□□□□ 0.92
HLA-C-209ENST00000495835 ZNF32P17041 273 aa20.78■□□□□ 0.92
HLA-C-209ENST00000495835 STOMP27105 288 aa20.78■□□□□ 0.92
HLA-C-209ENST00000495835 APEX1P27695 318 aaKnown RBP20.78■□□□□ 0.92
HLA-C-209ENST00000495835 RPL4P36578 427 aaKnown RBP20.78■□□□□ 0.92
HLA-C-209ENST00000495835 KLF3P57682 345 aaPredicted RBP20.78■□□□□ 0.92
HLA-C-209ENST00000495835 SPATS1Q496A3 300 aa20.78■□□□□ 0.92
HLA-C-209ENST00000495835 IGFN1Q86VF2 1251 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms