RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	FOXF2	Q12947	444 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	CEACAM16	Q2WEN9	425 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	VWA1	Q6PCB0	445 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	ZNF627	Q7L945	461 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	BTLA	Q7Z6A9	289 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	C17orf78	Q8N4C9	275 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	RPRML	Q8N4K4	120 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	NAXE	Q8NCW5	288 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	NANOS1	Q8WY41	292 aa	Known RBP	11.95	□□□□□ -0.5
APTX-231	ENST00000494973	NSMAF	Q92636	917 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	MYDGF	Q969H8	173 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	STARD4	Q96DR4	205 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	INTS14	Q96SY0	518 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	TEAD3	Q99594	435 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	FOXB1	Q99853	325 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	HDHD5	Q9BXW7	423 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	KCNN2	Q9H2S1	579 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	INPP5E	Q9NRR6	644 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	MRPS18A	Q9NVS2	196 aa	Known RBP	11.95	□□□□□ -0.5
APTX-231	ENST00000494973	ELOVL5	Q9NYP7	299 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973		Q9UFV3	132 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	MYRF	Q9Y2G1	1151 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	POLR1D	Q9Y2S0	133 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	ESPL1	Q14674	2120 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	INTS1	Q8N201	2190 aa	Known RBP	11.94	□□□□□ -0.5
APTX-231	ENST00000494973	CGA	P01215	116 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	HOXB1	P14653	301 aa	Predicted RBP	11.94	□□□□□ -0.5
APTX-231	ENST00000494973	COX5A	P20674	150 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	AGA	P20933	346 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	GNLY	P22749	145 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	HOXC12	P31275	282 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	NTF4	P34130	210 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	FAP	Q12884	760 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	KCNMB1	Q16558	191 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	KCTD21	Q4G0X4	260 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	LINC01590	Q5TEZ4	76 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	OR7E24	Q6IFN5	339 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	LRFN4	Q6PJG9	635 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	SHF	Q7M4L6	423 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	ZNF454	Q8N9F8	522 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	BBS1	Q8NFJ9	593 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	BPIFB6	Q8NFQ5	453 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	SLC26A10	Q8NG04	563 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	PRR7	Q8TB68	274 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	UBE2F	Q969M7	185 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	RNFT2	Q96EX2	444 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	HCAR1	Q9BXC0	346 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	YIPF3	Q9GZM5	350 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	MED20	Q9H944	212 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	MARCH7	Q9H992	704 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	SIAE	Q9HAT2	523 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	OBP2B	Q9NPH6	170 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	POLE4	Q9NR33	117 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	TMEM38B	Q9NVV0	291 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	GALNT8	Q9NY28	637 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	ERRFI1	Q9UJM3	462 aa	Predicted RBP	11.94	□□□□□ -0.5
APTX-231	ENST00000494973	SLC5A6	Q9Y289	635 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	COA3	Q9Y2R0	106 aa	Predicted RBP	11.94	□□□□□ -0.5
APTX-231	ENST00000494973	NBEA	Q8NFP9	2946 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	ALPK2	Q86TB3	2170 aa		11.94	□□□□□ -0.5
APTX-231	ENST00000494973	CCDC182	A6NF36	153 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	C12orf71	A8MTZ7	269 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	EEF1E1-BLOC1S5	C9J1V9	151 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	EEF1E1	O43324	174 aa	Known RBP	11.93	□□□□□ -0.5
APTX-231	ENST00000494973	C1QL1	O75973	258 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	GYPB	P06028	91 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	OR8G3P	P0DMU2	310 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	GAA	P10253	952 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	CLU	P10909	449 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	MYL12A	P19105	171 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	BMP5	P22003	454 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	DCK	P27707	260 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	PYCR1	P32322	319 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	CAPZA2	P47755	286 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	ENTPD1	P49961	510 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	CHN2	P52757	468 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	PCBD1	P61457	104 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	ADAM8	P78325	824 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	TEX30	Q5JUR7	227 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	ANKRD16	Q6P6B7	361 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	KLHL24	Q6TFL4	600 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	ZNF813	Q6ZN06	617 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	SLC16A9	Q7RTY1	509 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	SYT9	Q86SS6	491 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	FJX1	Q86VR8	437 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	GABRG1	Q8N1C3	465 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	ZNF540	Q8NDQ6	660 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	KISS1R	Q969F8	398 aa	Predicted RBP	11.93	□□□□□ -0.5
APTX-231	ENST00000494973	ZMYND19	Q96E35	227 aa	Predicted RBP	11.93	□□□□□ -0.5
APTX-231	ENST00000494973	BOD1	Q96IK1	185 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	TSSK2	Q96PF2	358 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	CDADC1	Q9BWV3	514 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	OR10A4	Q9H209	315 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	SEC61A2	Q9H9S3	476 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	CHCHD3	Q9NX63	227 aa	Known RBP	11.93	□□□□□ -0.5
APTX-231	ENST00000494973	PRSS50	Q9UI38	385 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	PSORS1C1	Q9UIG5	152 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	FBXL3	Q9UKT7	428 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	COMMD3-BMI1	R4GMX3	469 aa		11.93	□□□□□ -0.5
APTX-231	ENST00000494973	CIB4	A0PJX0	185 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms