RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 MMP7P09237 267 aaPredicted RBP10.75□□□□□ -0.69
SKA1-205ENST00000494518 MPV17P39210 176 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 AQP2P41181 271 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 WNT5AP41221 380 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 CRYBB2P43320 205 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 ZNF81P51508 661 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 HILS1P60008 231 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 SCGB2A2Q13296 93 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 TOP3AQ13472 1001 aaPredicted RBP10.75□□□□□ -0.69
SKA1-205ENST00000494518 NFYCQ13952 458 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 PCGF3Q3KNV8 242 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 NKAIN4Q8IVV8 208 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 ZNF101Q8IZC7 436 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 CPEB3Q8NE35 698 aaKnown RBP10.75□□□□□ -0.69
SKA1-205ENST00000494518 OR1J2Q8NGS2 313 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 OR10A6Q8NH74 314 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 MOSPD2Q8NHP6 518 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 ZFAND2BQ8WV99 257 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 DYDC1Q8WWB3 177 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 IPCEF1Q8WWN9 437 aaPredicted RBP10.75□□□□□ -0.69
SKA1-205ENST00000494518 RAB39BQ96DA2 213 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 BCL2L14Q9BZR8 327 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 LRMDAQ9H2I8 198 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 C1orf198Q9H425 327 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 UBAP1Q9NZ09 502 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 NDUFAF1Q9Y375 327 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 DOCK11Q5JSL3 2073 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 A0A0G2JMP0 313 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 A0A0X1KG70 313 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 ZSCAN5BA6NJL1 495 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 TRIM77I1YAP6 450 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 ERLIN1O75477 346 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 PTHP01270 115 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 IGHV1-46P01743 117 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 ACADSP16219 412 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 ZNF32P17041 273 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 FUT1P19526 365 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 PCGF2P35227 344 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 CRYBA2P53672 197 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 ERVK-25P63136 954 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 LCN2P80188 198 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 TEKQ02763 1124 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 CD47Q08722 323 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 SGCAQ16586 387 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 HIST3H3Q16695 136 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 HFEQ30201 348 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 SPRNQ5BIV9 151 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 BEND6Q5SZJ8 279 aaPredicted RBP10.74□□□□□ -0.69
SKA1-205ENST00000494518 THEM4Q5T1C6 240 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 AGBL2Q5U5Z8 902 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 DCAF12L2Q5VW00 463 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 C1QL2Q7Z5L3 287 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 PATL1Q86TB9 770 aaKnown RBP10.74□□□□□ -0.69
SKA1-205ENST00000494518 OR4M2Q8NGB6 313 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 SLC25A40Q8TBP6 338 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 FAM216AQ8WUB2 273 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 TMEM255BQ8WV15 326 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 CCL17Q92583 94 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 MPP4Q96JB8 637 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 GAL3ST1Q99999 423 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 ZNF426Q9BUY5 554 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 MRPL13Q9BYD1 178 aaKnown RBP10.74□□□□□ -0.69
SKA1-205ENST00000494518 KAT8Q9H7Z6 458 aaKnown RBP10.74□□□□□ -0.69
SKA1-205ENST00000494518 NANOGQ9H9S0 305 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 CCNB1IP1Q9NPC3 277 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 ESM1Q9NQ30 184 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 INIPQ9NRY2 104 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 C20orf141Q9NUB4 165 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 UGT2A1Q9Y4X1 527 aa10.74□□□□□ -0.69
SKA1-205ENST00000494518 CMYA5Q8N3K9 4069 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 LOC100509620A0A075B734 347 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 TMEM89A2RUT3 159 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 C5orf49A4QMS7 147 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 MGRN1O60291 552 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 PIP5K1CO60331 668 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 OR7A10O76100 309 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 IGHV3-13P01766 116 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 MT-ND1P03886 318 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 MT-ND5P03915 603 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 ANPEPP15144 967 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 EGR1P18146 543 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 STOMP27105 288 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 TAS2R41P59536 307 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 TTMPQ5BVD1 217 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 RFPL4BQ6ZWI9 263 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 DPPA2Q7Z7J5 298 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 BPIFB2Q8N4F0 458 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 DPP10Q8N608 796 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 CLDN22Q8N7P3 220 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 GEMIN6Q8WXD5 167 aaKnown RBP10.73□□□□□ -0.69
SKA1-205ENST00000494518 HDAC2Q92769 488 aaKnown RBP10.73□□□□□ -0.69
SKA1-205ENST00000494518 NABP1Q96AH0 204 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 SGTBQ96EQ0 304 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 ELMOD3Q96FG2 381 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 TIMD4Q96H15 378 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 RBM4Q9BWF3 364 aaKnown RBP10.73□□□□□ -0.69
SKA1-205ENST00000494518 SLC19A3Q9BZV2 496 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 OR2J1Q9GZK6 312 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 PCDHAC1Q9H158 963 aa10.73□□□□□ -0.69
SKA1-205ENST00000494518 KCNN2Q9H2S1 579 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms