RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 ZC3HAV1LQ96H79 300 aaKnown RBP12.77□□□□□ -0.37
BRCA1-223ENST00000494123 HRASLS5Q96KN8 279 aa12.77□□□□□ -0.37
BRCA1-223ENST00000494123 FOXN4Q96NZ1 517 aa12.77□□□□□ -0.37
BRCA1-223ENST00000494123 DDOQ99489 341 aa12.77□□□□□ -0.37
BRCA1-223ENST00000494123 RACGAP1Q9H0H5 632 aa12.77□□□□□ -0.37
BRCA1-223ENST00000494123 SLC17A5Q9NRA2 495 aa12.77□□□□□ -0.37
BRCA1-223ENST00000494123 FAM118AQ9NWS6 357 aa12.77□□□□□ -0.37
BRCA1-223ENST00000494123 UGT2A1Q9Y4X1 527 aa12.77□□□□□ -0.37
BRCA1-223ENST00000494123 LOC100130705A0A1B0GUX0 176 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 A0A1W2PR80 420 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 SH3D21A4FU49 640 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 M0R129 80 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 DCTN6O00399 190 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 TLX2O43763 284 aaPredicted RBP12.76□□□□□ -0.37
BRCA1-223ENST00000494123 PRKYO43930 277 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 HLA-DQA2P01906 255 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 GYPBP06028 91 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 LAP3P28838 519 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 GGT2P36268 569 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 KIR2DL3P43628 341 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 SLC25A1P53007 311 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 MRPS34P82930 218 aaKnown RBP12.76□□□□□ -0.37
BRCA1-223ENST00000494123 GLO1Q04760 184 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 PPA1Q15181 289 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 NRN1LQ496H8 165 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 FBXW10Q5XX13 1052 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 ZNF627Q7L945 461 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 CXXC5Q7LFL8 322 aaKnown RBP12.76□□□□□ -0.37
BRCA1-223ENST00000494123 ZBTB46Q86UZ6 589 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 CPOQ8IVL8 374 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 CYGBQ8WWM9 190 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 NANOS1Q8WY41 292 aaKnown RBP12.76□□□□□ -0.37
BRCA1-223ENST00000494123 HTRA1Q92743 480 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 WFIKKN1Q96NZ8 548 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 KCNN2Q9H2S1 579 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 NELFAQ9H3P2 528 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 MED20Q9H944 212 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 SIAEQ9HAT2 523 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 SLC24A3Q9HC58 644 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 AMDHD2Q9Y303 409 aa12.76□□□□□ -0.37
BRCA1-223ENST00000494123 SPTAN1Q13813 2472 aaKnown RBP12.75□□□□□ -0.37
BRCA1-223ENST00000494123 IGLV1-36A0A0B4J1U3 117 aa12.75□□□□□ -0.37
BRCA1-223ENST00000494123 FAM171A2A8MVW0 826 aa12.75□□□□□ -0.37
BRCA1-223ENST00000494123 DLGAP1O14490 977 aa12.75□□□□□ -0.37
BRCA1-223ENST00000494123 WNT11O96014 354 aa12.75□□□□□ -0.37
BRCA1-223ENST00000494123 HOXB1P14653 301 aaPredicted RBP12.75□□□□□ -0.37
BRCA1-223ENST00000494123 SPI1P17947 270 aa12.75□□□□□ -0.37
BRCA1-223ENST00000494123 MSR1P21757 451 aa12.75□□□□□ -0.37
BRCA1-223ENST00000494123 PYCR1P32322 319 aa12.75□□□□□ -0.37
BRCA1-223ENST00000494123 RPS7P62081 194 aaKnown RBP12.75□□□□□ -0.37
BRCA1-223ENST00000494123 DBPQ10586 325 aaPredicted RBP12.75□□□□□ -0.37
BRCA1-223ENST00000494123 TAB1Q15750 504 aa12.75□□□□□ -0.37
BRCA1-223ENST00000494123 SSX8Q7RTT4 187 aa12.75□□□□□ -0.37
BRCA1-223ENST00000494123 SLC16A14Q7RTX9 510 aa12.75□□□□□ -0.37
BRCA1-223ENST00000494123 WFDC8Q8IUA0 241 aa12.75□□□□□ -0.37
BRCA1-223ENST00000494123 DMRTC2Q8IXT2 367 aaPredicted RBP12.75□□□□□ -0.37
BRCA1-223ENST00000494123 CCDC36Q8IYA8 594 aa12.75□□□□□ -0.37
BRCA1-223ENST00000494123 DEPDC4Q8N2C3 294 aa12.75□□□□□ -0.37
BRCA1-223ENST00000494123 LRRC18Q8N456 261 aa12.75□□□□□ -0.37
BRCA1-223ENST00000494123 DHRSXQ8N5I4 330 aa12.75□□□□□ -0.37
BRCA1-223ENST00000494123 OR51L1Q8NGJ5 315 aa12.75□□□□□ -0.37
BRCA1-223ENST00000494123 TMEM163Q8TC26 289 aa12.75□□□□□ -0.37
BRCA1-223ENST00000494123 BOD1Q96IK1 185 aa12.75□□□□□ -0.37
BRCA1-223ENST00000494123 IL4I1Q96RQ9 567 aa12.75□□□□□ -0.37
BRCA1-223ENST00000494123 SH3GL3Q99963 347 aa12.75□□□□□ -0.37
BRCA1-223ENST00000494123 NMNAT2Q9BZQ4 307 aa12.75□□□□□ -0.37
BRCA1-223ENST00000494123 OR51V1Q9H2C8 321 aa12.75□□□□□ -0.37
BRCA1-223ENST00000494123 OBP2BQ9NPH6 170 aa12.75□□□□□ -0.37
BRCA1-223ENST00000494123 HINT3Q9NQE9 182 aaKnown RBP12.75□□□□□ -0.37
BRCA1-223ENST00000494123 ZNF226Q9NYT6 803 aa12.75□□□□□ -0.37
BRCA1-223ENST00000494123 CASKO14936 926 aa12.74□□□□□ -0.37
BRCA1-223ENST00000494123 SLC16A6O15403 523 aa12.74□□□□□ -0.37
BRCA1-223ENST00000494123 CLUP10909 449 aa12.74□□□□□ -0.37
BRCA1-223ENST00000494123 IGFBP2P18065 325 aa12.74□□□□□ -0.37
BRCA1-223ENST00000494123 TUBA1BP68363 451 aa12.74□□□□□ -0.37
BRCA1-223ENST00000494123 TUBA4AP68366 448 aa12.74□□□□□ -0.37
BRCA1-223ENST00000494123 KEAP1Q14145 624 aa12.74□□□□□ -0.37
BRCA1-223ENST00000494123 KLHL12Q53G59 568 aa12.74□□□□□ -0.37
BRCA1-223ENST00000494123 TTC23Q5W5X9 447 aa12.74□□□□□ -0.37
BRCA1-223ENST00000494123 FOXL2NBQ6ZUU3 175 aa12.74□□□□□ -0.37
BRCA1-223ENST00000494123 TUBA1AQ71U36 451 aa12.74□□□□□ -0.37
BRCA1-223ENST00000494123 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.74□□□□□ -0.37
BRCA1-223ENST00000494123 OR10H5Q8NGA6 315 aa12.74□□□□□ -0.37
BRCA1-223ENST00000494123 OR8J1Q8NGP2 316 aa12.74□□□□□ -0.37
BRCA1-223ENST00000494123 OR6K6Q8NGW6 343 aa12.74□□□□□ -0.37
BRCA1-223ENST00000494123 PTP4A1Q93096 173 aa12.74□□□□□ -0.37
BRCA1-223ENST00000494123 NABP1Q96AH0 204 aa12.74□□□□□ -0.37
BRCA1-223ENST00000494123 DACH2Q96NX9 599 aa12.74□□□□□ -0.37
BRCA1-223ENST00000494123 PSMG3-AS1Q96PY0 264 aa12.74□□□□□ -0.37
BRCA1-223ENST00000494123 PITX2Q99697 317 aa12.74□□□□□ -0.37
BRCA1-223ENST00000494123 APOL4Q9BPW4 351 aa12.74□□□□□ -0.37
BRCA1-223ENST00000494123 HCAR1Q9BXC0 346 aa12.74□□□□□ -0.37
BRCA1-223ENST00000494123 POLE4Q9NR33 117 aa12.74□□□□□ -0.37
BRCA1-223ENST00000494123 CRIM1Q9NZV1 1036 aa12.74□□□□□ -0.37
BRCA1-223ENST00000494123 H2AFY2Q9P0M6 372 aaPredicted RBP12.74□□□□□ -0.37
BRCA1-223ENST00000494123 NDRG4Q9ULP0 352 aaKnown RBP12.74□□□□□ -0.37
BRCA1-223ENST00000494123 DOPEY2Q9Y3R5 2298 aa12.74□□□□□ -0.37
BRCA1-223ENST00000494123 USP9YO00507 2555 aaPredicted RBP12.74□□□□□ -0.37
BRCA1-223ENST00000494123 ARPC4-TTLL3A0A0A6YYG9 625 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 PRODHO43272 600 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms