RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 UBE2SQ16763 222 aa2.1□□□□□ -2.07
SMC4-223ENST00000493695 OR52W1Q6IF63 320 aa2.1□□□□□ -2.07
SMC4-223ENST00000493695 SASS6Q6UVJ0 657 aa2.1□□□□□ -2.07
SMC4-223ENST00000493695 TMEM107Q6UX40 140 aa2.1□□□□□ -2.07
SMC4-223ENST00000493695 TEX43Q6ZNM6 134 aa2.1□□□□□ -2.07
SMC4-223ENST00000493695 ABHD13Q7L211 337 aa2.1□□□□□ -2.07
SMC4-223ENST00000493695 NIPA1Q7RTP0 329 aa2.1□□□□□ -2.07
SMC4-223ENST00000493695 HDDC2Q7Z4H3 204 aa2.1□□□□□ -2.07
SMC4-223ENST00000493695 FAM228AQ86W67 206 aa2.1□□□□□ -2.07
SMC4-223ENST00000493695 MMAAQ8IVH4 418 aaKnown RBP2.1□□□□□ -2.07
SMC4-223ENST00000493695 FBXL13Q8NEE6 735 aa2.1□□□□□ -2.07
SMC4-223ENST00000493695 B3GNT7Q8NFL0 401 aa2.1□□□□□ -2.07
SMC4-223ENST00000493695 OR10G2Q8NGC3 310 aa2.1□□□□□ -2.07
SMC4-223ENST00000493695 KCNG3Q8TAE7 436 aa2.1□□□□□ -2.07
SMC4-223ENST00000493695 UBALD1Q8TB05 177 aa2.1□□□□□ -2.07
SMC4-223ENST00000493695 DUS3LQ96G46 650 aaKnown RBP2.1□□□□□ -2.07
SMC4-223ENST00000493695 P2RX4Q99571 388 aa2.1□□□□□ -2.07
SMC4-223ENST00000493695 CRCT1Q9UGL9 99 aa2.1□□□□□ -2.07
SMC4-223ENST00000493695 NUP50Q9UKX7 468 aa2.1□□□□□ -2.07
SMC4-223ENST00000493695 TET2Q6N021 2002 aaPredicted RBP2.1□□□□□ -2.07
SMC4-223ENST00000493695 KIR2DS1A0A191URI9 304 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 HIDE1A8MVS5 230 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 DYNC1I1O14576 645 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 CLPXO76031 633 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 FGGP02679 453 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 GNAO1P09471 354 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 UQCRFS1P1P0C7P4 283 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 RPS9P46781 194 aaKnown RBP2.09□□□□□ -2.07
SMC4-223ENST00000493695 UBE2AP49459 152 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 ACTA1P68133 377 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 KIR2DS1Q14954 304 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 ANKRD22Q5VYY1 191 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 Q5W150 140 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 RNASEKQ6P5S7 137 aaKnown RBP2.09□□□□□ -2.07
SMC4-223ENST00000493695 ZYG11AQ6WRX3 759 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 CERS6Q6ZMG9 384 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 ZNF836Q6ZNA1 936 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 C19orf35Q6ZS72 473 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 NANOGNBQ7Z5D8 188 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 PDIK1LQ8N165 341 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 SPATA4Q8NEY3 305 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 OR7G2Q8NG99 324 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 RHEBL1Q8TAI7 183 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 SEH1LQ96EE3 360 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 RPF2Q9H7B2 306 aaKnown RBP2.09□□□□□ -2.07
SMC4-223ENST00000493695 ZDHHC4Q9NPG8 344 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 ISYNA1Q9NPH2 558 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 PSMC3IPQ9P2W1 217 aaPredicted RBP2.09□□□□□ -2.07
SMC4-223ENST00000493695 OPN4Q9UHM6 478 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 CTNNA3Q9UI47 895 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 IKBKGQ9Y6K9 419 aa2.09□□□□□ -2.07
SMC4-223ENST00000493695 CNTNAP1P78357 1384 aa2.09□□□□□ -2.08
SMC4-223ENST00000493695 IGHV3-74A0A0B4J1X5 117 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 TMEM150BA6NC51 233 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 INS-IGF2F8WCM5 200 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 KMOO15229 486 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 SPAG7O75391 227 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 RP2O75695 350 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 SNX4O95219 450 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 CISD3P0C7P0 127 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 PBLDP30039 288 aaPredicted RBP2.08□□□□□ -2.08
SMC4-223ENST00000493695 FOXN2P32314 431 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 ZNF138P52744 262 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 KRTAP12-4P60329 112 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 NUTF2P61970 127 aaKnown RBP2.08□□□□□ -2.08
SMC4-223ENST00000493695 SLAQ13239 276 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 CLINT1Q14677 625 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 TGFBIQ15582 683 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 VPS26BQ4G0F5 336 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 HES5Q5TA89 166 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 TAS2R42Q7RTR8 314 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 CYB561D1Q8N8Q1 229 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 OR10J6PQ8NGY7 276 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 AKR7LQ8NHP1 331 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 RAB3IL1Q8TBN0 382 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 CREB3L1Q96BA8 519 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 RASD2Q96D21 266 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 BMFQ96LC9 184 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 PARP12Q9H0J9 701 aaKnown RBP2.08□□□□□ -2.08
SMC4-223ENST00000493695 OR51M1Q9H341 326 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 UBE2ZQ9H832 354 aaPredicted RBP2.08□□□□□ -2.08
SMC4-223ENST00000493695 FGF20Q9NP95 211 aaPredicted RBP2.08□□□□□ -2.08
SMC4-223ENST00000493695 ZNF629Q9UEG4 869 aaPredicted RBP2.08□□□□□ -2.08
SMC4-223ENST00000493695 LSM7Q9UK45 103 aaKnown RBP2.08□□□□□ -2.08
SMC4-223ENST00000493695 KIAA1257Q9ULG3 409 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 ING4Q9UNL4 249 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 MAPK8IP3Q9UPT6 1336 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 IGSF9BQ9UPX0 1349 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 USP47Q96K76 1375 aa2.08□□□□□ -2.08
SMC4-223ENST00000493695 PIKFYVEQ9Y2I7 2098 aa2.07□□□□□ -2.08
SMC4-223ENST00000493695 UBXN8O00124 270 aa2.07□□□□□ -2.08
SMC4-223ENST00000493695 CDC7O00311 574 aa2.07□□□□□ -2.08
SMC4-223ENST00000493695 EEDO75530 441 aaKnown RBP2.07□□□□□ -2.08
SMC4-223ENST00000493695 SRP72O76094 671 aaKnown RBP2.07□□□□□ -2.08
SMC4-223ENST00000493695 RAB3DO95716 219 aa2.07□□□□□ -2.08
SMC4-223ENST00000493695 IGKV4-1P06312 121 aa2.07□□□□□ -2.08
SMC4-223ENST00000493695 TNNT2P45379 298 aaPredicted RBP2.07□□□□□ -2.08
SMC4-223ENST00000493695 CYB561P49447 251 aa2.07□□□□□ -2.08
SMC4-223ENST00000493695 SLC25A11Q02978 314 aaKnown RBP2.07□□□□□ -2.08
SMC4-223ENST00000493695 MXD1Q05195 221 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms