RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, human

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG4B-223	ENST00000493618	TANC2	Q9HCD6	1990 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	TRAV27	A0A087WT01	109 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	SLC22A23	A1A5C7	686 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	PPIH	O43447	177 aa	Known RBP	12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	CDC14B	O60729	498 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	ZNF682	O95780	498 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	TSPAN19	P0C672	248 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	THRB	P10828	461 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	ZNF32	P17041	273 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	ACHE	P22303	614 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	APLNR	P35414	380 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	ZNF133	P52736	654 aa	Predicted RBP	12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	UCP2	P55851	309 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	KLF3	P57682	345 aa	Predicted RBP	12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	ERVK-25	P63136	954 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	ST3GAL3	Q11203	375 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	SPATA46	Q5T0L3	261 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	SLC25A47	Q6Q0C1	308 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	RINL	Q6ZS11	566 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	HDDC2	Q7Z4H3	204 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	DPPA2	Q7Z7J5	298 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	NRM	Q8IXM6	262 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	OR1J2	Q8NGS2	313 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	OR1J1	Q8NGS3	322 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	AKR7L	Q8NHP1	331 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	LIPH	Q8WWY8	451 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	NABP1	Q96AH0	204 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	NMD3	Q96D46	503 aa	Known RBP	12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	BPIFA2	Q96DR5	249 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	KCNN2	Q9H2S1	579 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	TXNIP	Q9H3M7	391 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	C1orf198	Q9H425	327 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	MRGBP	Q9NV56	204 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	TMEFF2	Q9UIK5	374 aa	Predicted RBP	12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	ZNF346	Q9UL40	294 aa	Known RBP	12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	STAB1	Q9NY15	2570 aa		12.53	□□□□□ -0.4
ATG4B-223	ENST00000493618	CENPBD1	B2RD01	187 aa		12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	FAM157A	C9JC47	383 aa		12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	MGRN1	O60291	552 aa		12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	PTH	P01270	115 aa		12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	IGF2	P01344	180 aa		12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	SAG	P10523	405 aa	Predicted RBP	12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	COX4I1	P13073	169 aa		12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	ZNF250	P15622	560 aa		12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	SRP14	P37108	136 aa	Known RBP	12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	SELENOV	P59797	346 aa		12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	CTXN1	P60606	82 aa		12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	RPL27	P61353	136 aa	Known RBP	12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	CCL8	P80075	99 aa		12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	MRPS34	P82930	218 aa	Known RBP	12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	LIPE	Q05469	1076 aa		12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	TMEM154	Q6P9G4	183 aa		12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	SLC15A3	Q8IY34	581 aa		12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	OR51A7	Q8NH64	312 aa		12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	ZNF519	Q8TB69	540 aa		12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	SNX33	Q8WV41	574 aa		12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	C11orf40	Q8WZ69	217 aa		12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	C1orf159	Q96HA4	380 aa		12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	FNDC11	Q9BVV2	318 aa		12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	LRMDA	Q9H2I8	198 aa		12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	SIAE	Q9HAT2	523 aa		12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	HINT3	Q9NQE9	182 aa	Known RBP	12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	MAN2C1	Q9NTJ4	1040 aa		12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	TREM2	Q9NZC2	230 aa		12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	STX18	Q9P2W9	335 aa	Known RBP	12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	HIF3A	Q9Y2N7	669 aa		12.52	□□□□□ -0.41
ATG4B-223	ENST00000493618	IGLV3-9	A0A075B6K5	115 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618		A0A1W2PPL8	197 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	C17orf100	A8MU93	164 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618		H7C1C5	153 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	CXCR6	O00574	342 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	NME4	O00746	187 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	FFAR1	O14842	300 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	GSTA4	O15217	222 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	RP2	O75695	350 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	SNAP29	O95721	258 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	IFNW1	P05000	195 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	DRD4	P21917	467 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	STOM	P27105	288 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	WNT5A	P41221	380 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	RAD52	P43351	418 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	GPR4	P46093	362 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	SLC7A2	P52569	658 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	LCN6	P62502	163 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	TST	Q16762	297 aa	Known RBP	12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	NRN1L	Q496H8	165 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	AVPI1	Q5T686	147 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	TBPL2	Q6SJ96	375 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	LRRC75A	Q8NAA5	344 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	OR13C2	Q8NGS9	318 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	LZIC	Q8WZA0	190 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	C19orf24	Q9BVV8	132 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	BCL2L14	Q9BZR8	327 aa		12.51	□□□□□ -0.41
ATG4B-223	ENST00000493618	LOC100509620	A0A075B734	347 aa		12.5	□□□□□ -0.41
ATG4B-223	ENST00000493618	C5orf49	A4QMS7	147 aa		12.5	□□□□□ -0.41
ATG4B-223	ENST00000493618	EFCAB9	A8MZ26	197 aa		12.5	□□□□□ -0.41
ATG4B-223	ENST00000493618	TPD52L2	O43399	206 aa	Known RBP	12.5	□□□□□ -0.41
ATG4B-223	ENST00000493618	SERPINA1	P01009	418 aa		12.5	□□□□□ -0.41
ATG4B-223	ENST00000493618	IGHM	P01871	453 aa		12.5	□□□□□ -0.41
ATG4B-223	ENST00000493618	NCK1	P16333	377 aa		12.5	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms