RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 UGT2A1Q9Y4X1 527 aa12.17□□□□□ -0.46
CCM2-217ENST00000492883 ASH1LQ9NR48 2969 aaKnown RBP12.17□□□□□ -0.46
CCM2-217ENST00000492883 UTP20O75691 2785 aaKnown RBP12.17□□□□□ -0.46
CCM2-217ENST00000492883 MPDZO75970 2070 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 SHISA9B4DS77 424 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 BHLHE40O14503 412 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 HS3ST1O14792 307 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 IGLV1-44P01699 117 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 RAF1P04049 648 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 CELA3BP08861 270 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 CECR9P0C854 216 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 CTLA4P16410 223 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 ZNF23P17027 643 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 DNASE1P24855 282 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 CRABP1P29762 137 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 SPOCK1Q08629 439 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 C3orf36Q3SXR2 165 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 ZNF672Q499Z4 452 aaPredicted RBP12.16□□□□□ -0.46
CCM2-217ENST00000492883 FAM27BQ5VT28 67 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 ZFP1Q6P2D0 407 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 DNM1P34Q6PK57 102 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 HIPK1Q86Z02 1210 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 ZDHHC13Q8IUH4 622 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 OR2T33Q8NG76 320 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 OR8D4Q8NGM9 314 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 LILRB1Q8NHL6 650 aaPredicted RBP12.16□□□□□ -0.46
CCM2-217ENST00000492883 FGFBP3Q8TAT2 258 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 NUAK2Q9H093 628 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 SEMA6AQ9H2E6 1030 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 CCNB1IP1Q9NPC3 277 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 ZNF224Q9NZL3 707 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 MOKQ9UQ07 419 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 BAIAP2Q9UQB8 552 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 COA3Q9Y2R0 106 aaPredicted RBP12.16□□□□□ -0.46
CCM2-217ENST00000492883 ATP23Q9Y6H3 246 aa12.16□□□□□ -0.46
CCM2-217ENST00000492883 TP53P04637 393 aaPredicted RBP12.15□□□□□ -0.46
CCM2-217ENST00000492883 OSMP13725 252 aa12.15□□□□□ -0.46
CCM2-217ENST00000492883 LAP3P28838 519 aa12.15□□□□□ -0.46
CCM2-217ENST00000492883 CDH11P55287 796 aa12.15□□□□□ -0.46
CCM2-217ENST00000492883 NAAAQ02083 359 aa12.15□□□□□ -0.46
CCM2-217ENST00000492883 PLP2Q04941 152 aa12.15□□□□□ -0.46
CCM2-217ENST00000492883 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.15□□□□□ -0.46
CCM2-217ENST00000492883 RAB39AQ14964 217 aa12.15□□□□□ -0.46
CCM2-217ENST00000492883 ZSCAN26Q16670 478 aa12.15□□□□□ -0.46
CCM2-217ENST00000492883 PAMR1Q6UXH9 720 aa12.15□□□□□ -0.46
CCM2-217ENST00000492883 C20orf204Q6ZNR8 217 aa12.15□□□□□ -0.46
CCM2-217ENST00000492883 LNX2Q8N448 690 aa12.15□□□□□ -0.46
CCM2-217ENST00000492883 SDR9C7Q8NEX9 313 aa12.15□□□□□ -0.46
CCM2-217ENST00000492883 IL17RDQ8NFM7 739 aa12.15□□□□□ -0.46
CCM2-217ENST00000492883 OR4Q3Q8NH05 313 aa12.15□□□□□ -0.46
CCM2-217ENST00000492883 FBXW5Q969U6 566 aa12.15□□□□□ -0.46
CCM2-217ENST00000492883 NABP1Q96AH0 204 aa12.15□□□□□ -0.46
CCM2-217ENST00000492883 CENPNQ96H22 339 aaPredicted RBP12.15□□□□□ -0.46
CCM2-217ENST00000492883 FOXN4Q96NZ1 517 aa12.15□□□□□ -0.46
CCM2-217ENST00000492883 TSSK2Q96PF2 358 aa12.15□□□□□ -0.46
CCM2-217ENST00000492883 SNX18Q96RF0 628 aa12.15□□□□□ -0.46
CCM2-217ENST00000492883 NOX3Q9HBY0 568 aa12.15□□□□□ -0.46
CCM2-217ENST00000492883 RPRD1BQ9NQG5 326 aaKnown RBP12.15□□□□□ -0.46
CCM2-217ENST00000492883 PAPOLBQ9NRJ5 636 aaKnown RBP12.15□□□□□ -0.46
CCM2-217ENST00000492883 REV1Q9UBZ9 1251 aa12.15□□□□□ -0.46
CCM2-217ENST00000492883 ITGB1BP2Q9UKP3 347 aa12.15□□□□□ -0.46
CCM2-217ENST00000492883 FBXL3Q9UKT7 428 aa12.15□□□□□ -0.46
CCM2-217ENST00000492883 B9D1Q9UPM9 204 aa12.15□□□□□ -0.46
CCM2-217ENST00000492883 C12orf71A8MTZ7 269 aa12.14□□□□□ -0.47
CCM2-217ENST00000492883 ATP6V1G2-DDX39BF2Z307 99 aa12.14□□□□□ -0.47
CCM2-217ENST00000492883 IFNGP01579 166 aa12.14□□□□□ -0.47
CCM2-217ENST00000492883 MSR1P21757 451 aa12.14□□□□□ -0.47
CCM2-217ENST00000492883 DAPP51397 102 aa12.14□□□□□ -0.47
CCM2-217ENST00000492883 PCBD1P61457 104 aa12.14□□□□□ -0.47
CCM2-217ENST00000492883 HSF2Q03933 536 aa12.14□□□□□ -0.47
CCM2-217ENST00000492883 SLC27A4Q6P1M0 643 aa12.14□□□□□ -0.47
CCM2-217ENST00000492883 FOXL2NBQ6ZUU3 175 aa12.14□□□□□ -0.47
CCM2-217ENST00000492883 GLB1L2Q8IW92 636 aa12.14□□□□□ -0.47
CCM2-217ENST00000492883 OR6V1Q8N148 313 aa12.14□□□□□ -0.47
CCM2-217ENST00000492883 SVOPLQ8N434 492 aa12.14□□□□□ -0.47
CCM2-217ENST00000492883 ZNF611Q8N823 705 aa12.14□□□□□ -0.47
CCM2-217ENST00000492883 NPEPL1Q8NDH3 523 aa12.14□□□□□ -0.47
CCM2-217ENST00000492883 ICA1LQ8NDH6 482 aa12.14□□□□□ -0.47
CCM2-217ENST00000492883 SMAP2Q8WU79 429 aaPredicted RBP12.14□□□□□ -0.47
CCM2-217ENST00000492883 DNAJC9Q8WXX5 260 aa12.14□□□□□ -0.47
CCM2-217ENST00000492883 NINJ1Q92982 152 aa12.14□□□□□ -0.47
CCM2-217ENST00000492883 MS4A3Q96HJ5 214 aa12.14□□□□□ -0.47
CCM2-217ENST00000492883 POLE4Q9NR33 117 aa12.14□□□□□ -0.47
CCM2-217ENST00000492883 KLHL21Q9UJP4 597 aa12.14□□□□□ -0.47
CCM2-217ENST00000492883 FREM1Q5H8C1 2179 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 PKDREJQ9NTG1 2253 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 ADGRG4Q8IZF6 3080 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 IQCMA0A1B0GVH7 501 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 OR6C68A6NDL8 312 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 E7EQL1 145 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 DCTN6O00399 190 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 ATE1O95260 518 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 MPZL1O95297 269 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 PTHP01270 115 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 SERPINA5P05154 406 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 CST2P09228 141 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 ZNF14P17017 642 aaPredicted RBP12.13□□□□□ -0.47
CCM2-217ENST00000492883 ZNF32P17041 273 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 FABP6P51161 128 aa12.13□□□□□ -0.47
CCM2-217ENST00000492883 GINS1Q14691 196 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms