RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 PLPP3O14495 311 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 NPIPB7O75200 414 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 ALOX12BO75342 701 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 KRT33AO76009 404 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 HEXBP07686 556 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 ANOS1P23352 680 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 CAPZA2P47755 286 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 POU3F4P49335 361 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 BTG1P62324 171 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 PAPD4Q6PIY7 484 aaKnown RBP11.18□□□□□ -0.62
HMGN1-220ENST00000492280 S100A16Q96FQ6 103 aaKnown RBP11.18□□□□□ -0.62
HMGN1-220ENST00000492280 OR8B4Q96RC9 309 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 SLITRK2Q9H156 845 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 KLRF1Q9NZS2 232 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 KLHL9Q9P2J3 617 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 TEX51A0A1B0GUA7 166 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 DCDC2BA2VCK2 349 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 A8MVM7 634 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 GPR171O14626 319 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 ZNF254O75437 659 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 SCRG1O75711 98 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 S100A1P23297 94 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 ART1P52961 327 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 PNLIPRP2P54317 469 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 SPOCK1Q08629 439 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 SLC17A1Q14916 467 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 NKAIN1Q4KMZ8 207 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 PRAMEF20Q5VT98 475 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 GRINAQ7Z429 371 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 ANKRD37Q7Z713 158 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 BPHLQ86WA6 291 aaPredicted RBP11.18□□□□□ -0.62
HMGN1-220ENST00000492280 GPR148Q8TDV2 347 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 ZNF431Q8TF32 576 aaPredicted RBP11.18□□□□□ -0.62
HMGN1-220ENST00000492280 METTL17Q9H7H0 456 aaPredicted RBP11.18□□□□□ -0.62
HMGN1-220ENST00000492280 CA10Q9NS85 328 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 TAS2R4Q9NYW5 299 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 PCDHGA5Q9Y5G8 931 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 KNTC1P50748 2209 aa11.18□□□□□ -0.62
HMGN1-220ENST00000492280 A0A1W2PNR3 127 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 K7ESF4 209 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 PDGFBP01127 241 aaPredicted RBP11.17□□□□□ -0.62
HMGN1-220ENST00000492280 CCL7P80098 99 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 TIGD3Q6B0B8 471 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 GPR139Q6DWJ6 353 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 LRFN4Q6PJG9 635 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 OR10G3Q8NGC4 313 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 OR8H1Q8NGG4 311 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 HAVCR1Q96D42 359 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 NXPE2Q96DL1 559 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 C5orf34Q96MH7 638 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 DCBLD2Q96PD2 775 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.17□□□□□ -0.62
HMGN1-220ENST00000492280 TXNIPQ9H3M7 391 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 SLA2Q9H6Q3 261 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 CENPMQ9NSP4 180 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 ITGB1BP2Q9UKP3 347 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 TMEM200CA6NKL6 621 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 EIF4E2O60573 245 aaKnown RBP11.17□□□□□ -0.62
HMGN1-220ENST00000492280 ANXA3P12429 323 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 CXCL12P48061 93 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 TNK1Q13470 666 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 NDUFA5Q16718 116 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 DCXRQ7Z4W1 244 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 SPEM1Q8N4L4 309 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 UXS1Q8NBZ7 420 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 FCAMRQ8WWV6 532 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 NKD1Q969G9 470 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 GTPBP2Q9BX10 602 aaKnown RBP11.17□□□□□ -0.62
HMGN1-220ENST00000492280 NIPAL2Q9H841 368 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 BDP1A6H8Y1 2624 aa11.17□□□□□ -0.62
HMGN1-220ENST00000492280 TRAV18A0A075B6X5 111 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 G3V3Y1 287 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 MS4A18H0YCH9 400 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 GABARAPH6UMI1 98 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 SIGLEC6O43699 453 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 EFNA2O43921 213 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 STARD6P59095 220 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 DCAF7P61962 342 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 PUDPQ08623 228 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 MS4A18Q3C1V0 323 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 PCGF3Q3KNV8 242 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 EMC4Q5J8M3 183 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 CARD17Q5XLA6 110 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 B3GNTL1Q67FW5 361 aaPredicted RBP11.16□□□□□ -0.62
HMGN1-220ENST00000492280 BTN2A1Q7KYR7 527 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 RTN4RL2Q86UN3 420 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 OR2T35Q8NGX2 323 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 MIB2Q96AX9 1013 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 ZNF768Q9H5H4 540 aaKnown RBP11.16□□□□□ -0.62
HMGN1-220ENST00000492280 OCIAD1Q9NX40 245 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 ZNF69Q9UC07 566 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 A0A1W2PQD3 144 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 TMEM212A6NML5 194 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 FTCDNL1E5RQL4 147 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 MEN1O00255 615 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 TO15178 435 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 TRIM3O75382 744 aaPredicted RBP11.16□□□□□ -0.62
HMGN1-220ENST00000492280 OR2J2O76002 312 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 SIX6O95475 246 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 SLC26A5P58743 744 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms