RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 SIGLEC7Q9Y286 467 aa21.29■■□□□ 1
UPF3A-209ENST00000492270 T-ENOLP0DO92 83 aa21.28■■□□□ 1
UPF3A-209ENST00000492270 ITGA2P17301 1181 aa21.28■■□□□ 1
UPF3A-209ENST00000492270 FXYD6P3P58550 94 aa21.28■■□□□ 1
UPF3A-209ENST00000492270 SGCAQ16586 387 aa21.28■■□□□ 1
UPF3A-209ENST00000492270 MESTQ5EB52 335 aa21.28■■□□□ 1
UPF3A-209ENST00000492270 FAM205BPQ63HN1 556 aa21.28■■□□□ 1
UPF3A-209ENST00000492270 ARIH2OSQ8N7S6 290 aa21.28■■□□□ 1
UPF3A-209ENST00000492270 SLC30A7Q8NEW0 376 aa21.28■■□□□ 1
UPF3A-209ENST00000492270 OR10H5Q8NGA6 315 aa21.28■■□□□ 1
UPF3A-209ENST00000492270 RSRC1Q96IZ7 334 aaKnown RBP21.28■■□□□ 1
UPF3A-209ENST00000492270 RBP7Q96R05 134 aa21.28■■□□□ 1
UPF3A-209ENST00000492270 DOK1Q99704 481 aa21.28■■□□□ 1
UPF3A-209ENST00000492270 GPA33Q99795 319 aa21.28■■□□□ 1
UPF3A-209ENST00000492270 SIAEQ9HAT2 523 aa21.28■■□□□ 1
UPF3A-209ENST00000492270 IL20RAQ9UHF4 553 aa21.28■■□□□ 1
UPF3A-209ENST00000492270 SH3PXD2BA1X283 911 aa21.27■■□□□ 1
UPF3A-209ENST00000492270 A6NIZ1 184 aa21.27■■□□□ 1
UPF3A-209ENST00000492270 PTP4A3O75365 173 aa21.27■■□□□ 1
UPF3A-209ENST00000492270 GADD45GO95257 159 aa21.27■■□□□ 1
UPF3A-209ENST00000492270 F12P00748 615 aaPredicted RBP21.27■■□□□ 1
UPF3A-209ENST00000492270 FABP3P05413 133 aa21.27■■□□□ 1
UPF3A-209ENST00000492270 CD14P08571 375 aa21.27■■□□□ 1
UPF3A-209ENST00000492270 NR2C1P13056 603 aa21.27■■□□□ 1
UPF3A-209ENST00000492270 PPOXP50336 477 aa21.27■■□□□ 1
UPF3A-209ENST00000492270 RAP1BP61224 184 aa21.27■■□□□ 1
UPF3A-209ENST00000492270 RAP1AP62834 184 aa21.27■■□□□ 1
UPF3A-209ENST00000492270 GALK2Q01415 458 aa21.27■■□□□ 1
UPF3A-209ENST00000492270 SPATS1Q496A3 300 aa21.27■■□□□ 1
UPF3A-209ENST00000492270 THEM4Q5T1C6 240 aa21.27■■□□□ 1
UPF3A-209ENST00000492270 THSD4Q6ZMP0 1018 aa21.27■■□□□ 1
UPF3A-209ENST00000492270 FAM122BQ7Z309 247 aa21.27■■□□□ 1
UPF3A-209ENST00000492270 DPPA2Q7Z7J5 298 aa21.27■■□□□ 1
UPF3A-209ENST00000492270 ZCCHC24Q8N2G6 241 aaKnown RBP21.27■■□□□ 1
UPF3A-209ENST00000492270 MCUR1Q96AQ8 359 aa21.27■■□□□ 1
UPF3A-209ENST00000492270 MRPL37Q9BZE1 423 aaKnown RBP21.27■■□□□ 1
UPF3A-209ENST00000492270 AURKCQ9UQB9 309 aa21.27■■□□□ 1
UPF3A-209ENST00000492270 CMAHPQ9Y471 501 aa21.27■■□□□ 1
UPF3A-209ENST00000492270 ABCA1O95477 2261 aa21.26■□□□□ 0.99
UPF3A-209ENST00000492270 A0A096LNT2 108 aa21.26■□□□□ 0.99
UPF3A-209ENST00000492270 MGRN1O60291 552 aa21.26■□□□□ 0.99
UPF3A-209ENST00000492270 NDUFB2O95178 105 aa21.26■□□□□ 0.99
UPF3A-209ENST00000492270 IGFBP1P08833 259 aaPredicted RBP21.26■□□□□ 0.99
UPF3A-209ENST00000492270 ZNF32P17041 273 aa21.26■□□□□ 0.99
UPF3A-209ENST00000492270 FAM168AQ92567 244 aa21.26■□□□□ 0.99
UPF3A-209ENST00000492270 MRPL24Q96A35 216 aaKnown RBP21.26■□□□□ 0.99
UPF3A-209ENST00000492270 RASD2Q96D21 266 aa21.26■□□□□ 0.99
UPF3A-209ENST00000492270 ZNF570Q96NI8 536 aa21.26■□□□□ 0.99
UPF3A-209ENST00000492270 OR51B6Q9H340 312 aa21.26■□□□□ 0.99
UPF3A-209ENST00000492270 GRHPRQ9UBQ7 328 aa21.26■□□□□ 0.99
UPF3A-209ENST00000492270 ADAM21Q9UKJ8 722 aa21.26■□□□□ 0.99
UPF3A-209ENST00000492270 FZR1Q9UM11 496 aa21.26■□□□□ 0.99
UPF3A-209ENST00000492270 SPEF1Q9Y4P9 236 aa21.26■□□□□ 0.99
UPF3A-209ENST00000492270 FKBP7Q9Y680 259 aa21.26■□□□□ 0.99
UPF3A-209ENST00000492270 TEX13CA0A0J9YWL9 993 aa21.25■□□□□ 0.99
UPF3A-209ENST00000492270 A0A1W2PPL8 197 aa21.25■□□□□ 0.99
UPF3A-209ENST00000492270 UNC119BA6NIH7 251 aa21.25■□□□□ 0.99
UPF3A-209ENST00000492270 VSTM5A8MXK1 200 aa21.25■□□□□ 0.99
UPF3A-209ENST00000492270 FAM157BP0CG42 384 aa21.25■□□□□ 0.99
UPF3A-209ENST00000492270 CALB2P22676 271 aa21.25■□□□□ 0.99
UPF3A-209ENST00000492270 APEX1P27695 318 aaKnown RBP21.25■□□□□ 0.99
UPF3A-209ENST00000492270 RRM2P31350 389 aa21.25■□□□□ 0.99
UPF3A-209ENST00000492270 GLRXP35754 106 aa21.25■□□□□ 0.99
UPF3A-209ENST00000492270 PABPC1L2AQ5JQF8 200 aa21.25■□□□□ 0.99
UPF3A-209ENST00000492270 ZER1Q7Z7L7 766 aa21.25■□□□□ 0.99
UPF3A-209ENST00000492270 LRP11Q86VZ4 500 aa21.25■□□□□ 0.99
UPF3A-209ENST00000492270 ZDHHC21Q8IVQ6 265 aa21.25■□□□□ 0.99
UPF3A-209ENST00000492270 CPEB3Q8NE35 698 aaKnown RBP21.25■□□□□ 0.99
UPF3A-209ENST00000492270 FNDC8Q8TC99 324 aa21.25■□□□□ 0.99
UPF3A-209ENST00000492270 C10orf105Q8TEF2 133 aa21.25■□□□□ 0.99
UPF3A-209ENST00000492270 SYT3Q9BQG1 590 aa21.25■□□□□ 0.99
UPF3A-209ENST00000492270 CCNB1IP1Q9NPC3 277 aa21.25■□□□□ 0.99
UPF3A-209ENST00000492270 ACTR3BQ9P1U1 418 aa21.25■□□□□ 0.99
UPF3A-209ENST00000492270 SLC7A8Q9UHI5 535 aa21.25■□□□□ 0.99
UPF3A-209ENST00000492270 SLC22A23A1A5C7 686 aa21.24■□□□□ 0.99
UPF3A-209ENST00000492270 IMPA2O14732 288 aa21.24■□□□□ 0.99
UPF3A-209ENST00000492270 LAP3P28838 519 aa21.24■□□□□ 0.99
UPF3A-209ENST00000492270 DSCR9P59020 149 aa21.24■□□□□ 0.99
UPF3A-209ENST00000492270 FOXL2NBQ6ZUU3 175 aa21.24■□□□□ 0.99
UPF3A-209ENST00000492270 FOXN4Q96NZ1 517 aa21.24■□□□□ 0.99
UPF3A-209ENST00000492270 GPX7Q96SL4 187 aaPredicted RBP21.24■□□□□ 0.99
UPF3A-209ENST00000492270 KCNN2Q9H2S1 579 aa21.24■□□□□ 0.99
UPF3A-209ENST00000492270 CDH20Q9HBT6 801 aa21.24■□□□□ 0.99
UPF3A-209ENST00000492270 DYNLRB1Q9NP97 96 aa21.24■□□□□ 0.99
UPF3A-209ENST00000492270 IL1RAPQ9NPH3 570 aa21.24■□□□□ 0.99
UPF3A-209ENST00000492270 KRCC1Q9NPI7 259 aaPredicted RBP21.24■□□□□ 0.99
UPF3A-209ENST00000492270 NRIP3Q9NQ35 241 aa21.24■□□□□ 0.99
UPF3A-209ENST00000492270 MYEF2Q9P2K5 600 aaKnown RBP21.24■□□□□ 0.99
UPF3A-209ENST00000492270 HIVEP2P31629 2446 aa21.23■□□□□ 0.99
UPF3A-209ENST00000492270 IQCMA0A1B0GVH7 501 aa21.23■□□□□ 0.99
UPF3A-209ENST00000492270 TCRBV5S2A0A599 114 aa21.23■□□□□ 0.99
UPF3A-209ENST00000492270 XKRYO14609 159 aa21.23■□□□□ 0.99
UPF3A-209ENST00000492270 SCG5P05408 212 aa21.23■□□□□ 0.99
UPF3A-209ENST00000492270 SMIM11AP58511 58 aa21.23■□□□□ 0.99
UPF3A-209ENST00000492270 ERVS71-1P61550 626 aa21.23■□□□□ 0.99
UPF3A-209ENST00000492270 HSF2Q03933 536 aa21.23■□□□□ 0.99
UPF3A-209ENST00000492270 PLP2Q04941 152 aa21.23■□□□□ 0.99
UPF3A-209ENST00000492270 KRR1Q13601 381 aaKnown RBP21.23■□□□□ 0.99
UPF3A-209ENST00000492270 FAM27BQ5VT28 67 aa21.23■□□□□ 0.99
UPF3A-209ENST00000492270 AKR7LQ8NHP1 331 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms