RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 CYTL1Q9NRR1 136 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 IKBKGQ9Y6K9 419 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 BDP1A6H8Y1 2624 aa2.4□□□□□ -2.03
VTA1-204ENST00000491881 PHF3Q92576 2039 aaKnown RBP2.4□□□□□ -2.03
VTA1-204ENST00000491881 EIF4G3O43432 1585 aaKnown RBP2.4□□□□□ -2.03
VTA1-204ENST00000491881 KIAA0556O60303 1618 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 CEMIPQ8WUJ3 1361 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 CFAP47Q6ZTR5 3102 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 CAMTA1Q9Y6Y1 1673 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 TRAV39A0A0B4J263 110 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 F6UB75 175 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 INS-IGF2F8WCM5 200 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 AIREO43918 545 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 CDKN1BP46527 198 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 GPX6P59796 221 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 NUTF2P61970 127 aaKnown RBP2.39□□□□□ -2.03
VTA1-204ENST00000491881 ACTA2P62736 377 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 ACTG2P63267 376 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 ACTC1P68032 377 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 IRX3P78415 501 aaPredicted RBP2.39□□□□□ -2.03
VTA1-204ENST00000491881 VPS26BQ4G0F5 336 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 HES5Q5TA89 166 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 IGFL3Q6UXB1 125 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 ZNF493Q6ZR52 646 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 FAM43BQ6ZT52 329 aaPredicted RBP2.39□□□□□ -2.03
VTA1-204ENST00000491881 ABHD13Q7L211 337 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 TAS2R42Q7RTR8 314 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 PDIK1LQ8N165 341 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 B3GNT7Q8NFL0 401 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 OR2L8Q8NGY9 312 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 AKR7LQ8NHP1 331 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 PLPPR1Q8TBJ4 325 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 FAM3DQ96BQ1 224 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 LRRC58Q96CX6 371 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 TCHPQ9BT92 498 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 MRPL37Q9BZE1 423 aaKnown RBP2.39□□□□□ -2.03
VTA1-204ENST00000491881 LINC00597Q9H2U6 94 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 NOX3Q9HBY0 568 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 ZNF629Q9UEG4 869 aaPredicted RBP2.39□□□□□ -2.03
VTA1-204ENST00000491881 CTNNA3Q9UI47 895 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 STARD10Q9Y365 291 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 GLI2P10070 1586 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 SHANK3Q9BYB0 1731 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 CENPJQ9HC77 1338 aaPredicted RBP2.39□□□□□ -2.03
VTA1-204ENST00000491881 IFT140Q96RY7 1462 aa2.39□□□□□ -2.03
VTA1-204ENST00000491881 ASH1LQ9NR48 2969 aaKnown RBP2.38□□□□□ -2.03
VTA1-204ENST00000491881 TOPBP1Q92547 1522 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 MYO15BQ96JP2 1530 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 RIMS1Q86UR5 1692 aaKnown RBP2.38□□□□□ -2.03
VTA1-204ENST00000491881 FRMPD3Q5JV73 1810 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 USP9XQ93008 2570 aaPredicted RBP2.38□□□□□ -2.03
VTA1-204ENST00000491881 IGLV4-60A0A075B6I1 120 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 IGHV3-66A0A0C4DH42 116 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 FAM47DPA6NHR8 397 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 RTEL1-TNFRSF6BF6WH68 1400 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 CDC7O00311 574 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 ZNF324O75467 553 aaPredicted RBP2.38□□□□□ -2.03
VTA1-204ENST00000491881 EEDO75530 441 aaKnown RBP2.38□□□□□ -2.03
VTA1-204ENST00000491881 CIB2O75838 187 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 C6orf47O95873 294 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 CST1P01037 141 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 FABP3P05413 133 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 UQCRFS1P1P0C7P4 283 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 TROVE2P10155 538 aaKnown RBP eCLIP2.38□□□□□ -2.03
VTA1-204ENST00000491881 PRPS2P11908 318 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 LINC00315P59091 139 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 GINS1Q14691 196 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 NWD1Q149M9 1564 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 PON3Q15166 354 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 UBE2SQ16763 222 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 KHDRBS2Q5VWX1 349 aaKnown RBP2.38□□□□□ -2.03
VTA1-204ENST00000491881 FAM71E1Q6IPT2 247 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 ZNF836Q6ZNA1 936 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 ASCL5Q7RTU5 278 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 FAM228AQ86W67 206 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 SLC22A9Q8IVM8 553 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 LIX1Q8N485 282 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 MS4A15Q8N5U1 240 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 HSD17B11Q8NBQ5 300 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 OR10G4Q8NGN3 311 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 OR10R2Q8NGX6 335 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 SLC2A14Q8TDB8 520 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 GPR151Q8TDV0 419 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 CCDC126Q96EE4 140 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 ILKAPQ9H0C8 392 aaPredicted RBP2.38□□□□□ -2.03
VTA1-204ENST00000491881 SLC40A1Q9NP59 571 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 INPP5EQ9NRR6 644 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 PISDQ9UG56 409 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 MROH7-TTC4A0A0A0MT08 1334 aa2.38□□□□□ -2.03
VTA1-204ENST00000491881 CNTNAP1P78357 1384 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 CARMIL3Q8ND23 1372 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 RLFQ13129 1914 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 FLNBO75369 2602 aaKnown RBP2.37□□□□□ -2.03
VTA1-204ENST00000491881 A0A1W2PP18 115 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 ENTPD5O75356 428 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 GABARAPO95166 117 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 SLC25A14O95258 325 aaPredicted RBP2.37□□□□□ -2.03
VTA1-204ENST00000491881 RAB3DO95716 219 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 ZNF823P16415 610 aa2.37□□□□□ -2.03
VTA1-204ENST00000491881 HRH1P35367 487 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms