RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 VSX1Q9NZR4 365 aaPredicted RBP14.15□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 PDP1Q9P0J1 537 aaPredicted RBP14.15□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 FBXL3Q9UKT7 428 aa14.15□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 CSMD1Q96PZ7 3565 aa14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 A0A1W2PPL8 197 aa14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 E7EQL1 145 aa14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 IDH3BO43837 385 aa14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 DEAF1O75398 565 aaPredicted RBP14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 PATE4P0C8F1 98 aa14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 ZNF14P17017 642 aaPredicted RBP14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 CALCRP30988 508 aa14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 CDKN2AP42771 156 aaKnown RBP14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 GUCA1AP43080 201 aaPredicted RBP14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 GIPRP48546 466 aa14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 CLEC12AQ5QGZ9 265 aa14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 FOXL2NBQ6ZUU3 175 aa14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 IL17RDQ8NFM7 739 aa14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 TMEM171Q8WVE6 324 aa14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 IGFBPL1Q8WX77 278 aa14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 FEVQ99581 238 aa14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 FOXC2Q99958 501 aa14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 NIPSNAP1Q9BPW8 284 aa14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 DHRS9Q9BPW9 319 aa14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 PLA2G12AQ9BZM1 189 aa14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 SYT4Q9H2B2 425 aa14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 RNF121Q9H920 327 aa14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 FAIMQ9NVQ4 179 aa14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 IL20Q9NYY1 176 aa14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.14□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 ANKRD17O75179 2603 aaKnown RBP14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 IGHV2OR16-5A0A0B4J2B6 119 aa14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 BHLHE40O14503 412 aa14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 SLC16A7O60669 478 aa14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 TMCC2O75069 709 aa14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 SOX14O95416 240 aa14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 DANCRP0C864 163 aa14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 HIST1H1CP16403 213 aaKnown RBP14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 CTLA4P16410 223 aa14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 COX10Q12887 443 aa14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 RAB39AQ14964 217 aa14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 ETFDHQ16134 617 aa14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 PGGHGQ32M88 737 aa14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 LEG1Q6P5S2 330 aa14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 CD300LDQ6UXZ3 194 aa14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 OR8D4Q8NGM9 314 aa14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 DUS3LQ96G46 650 aaKnown RBP14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 MS4A3Q96HJ5 214 aa14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 SNX18Q96RF0 628 aa14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 CCNB1IP1Q9NPC3 277 aa14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 ARMC1Q9NVT9 282 aa14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 LAMP3Q9UQV4 416 aa14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 AP4S1Q9Y587 144 aa14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 TACC2O95359 2948 aa14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 POLQO75417 2590 aa14.13□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 LRBAP50851 2863 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 SMPD2O60906 423 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 KHDRBS3O75525 346 aaKnown RBP14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 RENP00797 406 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 SOD3P08294 240 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 MSR1P21757 451 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 FABP6P51161 128 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 ARHGDIAP52565 204 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 TESK1Q15569 626 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 ATP6AP1Q15904 470 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 FAM27BQ5VT28 67 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 ZNF544Q6NX49 715 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 SHQ1Q6PI26 577 aaKnown RBP14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 DNM1P34Q6PK57 102 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 HS3ST5Q8IZT8 346 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 FBXL14Q8N1E6 418 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 SDR9C7Q8NEX9 313 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 OR4F15Q8NGB8 312 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 OR4K13Q8NH42 304 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 NMNAT3Q96T66 252 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 TSSK6Q9BXA6 273 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 NUAK2Q9H093 628 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 CXXC4Q9H2H0 198 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 CXorf56Q9H5V9 222 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 RERGLQ9H628 205 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 ZNF556Q9HAH1 456 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 POLE4Q9NR33 117 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 MAST4O15021 2626 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 NAV2Q8IVL1 2488 aa14.12□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 TEX15Q9BXT5 2789 aa14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 PTHP01270 115 aa14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 TP53P04637 393 aaPredicted RBP14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 SERPINA5P05154 406 aa14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 IGFBP1P08833 259 aaPredicted RBP14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 CST2P09228 141 aa14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 MMP7P09237 267 aaPredicted RBP14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 FCGR1AP12314 374 aa14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 ANXA8P13928 327 aa14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 FASP25445 335 aa14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 LAP3P28838 519 aa14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 CRABP1P29762 137 aa14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 HSF2Q03933 536 aa14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 SLC35F1Q5T1Q4 408 aa14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 AGAP6Q5VW22 663 aa14.11□□□□□ -0.15
MSH5-SAPCD1-206ENST00000491552 DTX2Q86UW9 622 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms