RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, human

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP188-208	ENST00000491502	SLC16A9	Q7RTY1	509 aa		11.98	□□□□□ -0.49
NUP188-208	ENST00000491502	ZBTB46	Q86UZ6	589 aa		11.98	□□□□□ -0.49
NUP188-208	ENST00000491502	KDM8	Q8N371	416 aa		11.98	□□□□□ -0.49
NUP188-208	ENST00000491502	OR10H4	Q8NGA5	316 aa		11.98	□□□□□ -0.49
NUP188-208	ENST00000491502	OR4F15	Q8NGB8	312 aa		11.98	□□□□□ -0.49
NUP188-208	ENST00000491502	OR9K2	Q8NGE7	335 aa		11.98	□□□□□ -0.49
NUP188-208	ENST00000491502	ZMYND19	Q96E35	227 aa	Predicted RBP	11.98	□□□□□ -0.49
NUP188-208	ENST00000491502	HCAR1	Q9BXC0	346 aa		11.98	□□□□□ -0.49
NUP188-208	ENST00000491502	PRRG4	Q9BZD6	226 aa		11.98	□□□□□ -0.49
NUP188-208	ENST00000491502	YIPF3	Q9GZM5	350 aa		11.98	□□□□□ -0.49
NUP188-208	ENST00000491502	B3GAT1	Q9P2W7	334 aa		11.98	□□□□□ -0.49
NUP188-208	ENST00000491502	B9D1	Q9UPM9	204 aa		11.98	□□□□□ -0.49
NUP188-208	ENST00000491502	FAM215A	Q9Y5M1	114 aa		11.98	□□□□□ -0.49
NUP188-208	ENST00000491502	UNC79	Q9P2D8	2635 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	NAV2	Q8IVL1	2488 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	OR6C65	A6NJZ3	312 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	C12orf71	A8MTZ7	269 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	ZNF670-ZNF695	F2Z2N8	137 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	TRAF3IP2	O43734	574 aa	Predicted RBP	11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	SLC16A7	O60669	478 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	CYTIP	O60759	359 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	HLA-DQA2	P01906	255 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	MT-ND5	P03915	603 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	GYPB	P06028	91 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	GLI4	P10075	376 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	FCGR2A	P12318	317 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	HLA-DOB	P13765	273 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	CPN1	P15169	458 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	TMBIM6	P55061	237 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	CLDN18	P56856	261 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	MRPL28	Q13084	256 aa	Known RBP	11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	GALE	Q14376	348 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	MELK	Q14680	651 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	SLC17A1	Q14916	467 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	RNPS1	Q15287	305 aa	Known RBP	11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	RIPPLY2	Q5TAB7	128 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	RTL6	Q6ICC9	239 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	CREB3L2	Q70SY1	520 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	FCRLA	Q7L513	359 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	SHF	Q7M4L6	423 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	KCTD20	Q7Z5Y7	419 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	CLVS1	Q8IUQ0	354 aa	Predicted RBP	11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	MCEMP1	Q8IX19	187 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	SLC35F2	Q8IXU6	374 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	RAB2B	Q8WUD1	216 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	KISS1R	Q969F8	398 aa	Predicted RBP	11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	INTS14	Q96SY0	518 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	KCNK17	Q96T54	332 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	MGLL	Q99685	303 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	PRDM14	Q9GZV8	571 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	NUAK2	Q9H093	628 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	RERGL	Q9H628	205 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	ADGRL4	Q9HBW9	690 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	KCNJ16	Q9NPI9	418 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	B3GAT2	Q9NPZ5	323 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	PARPBP	Q9NWS1	579 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	ERVK13-1	Q9NX77	482 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	KLHL9	Q9P2J3	617 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	RSL24D1	Q9UHA3	163 aa	Known RBP	11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	RCE1	Q9Y256	329 aa		11.97	□□□□□ -0.49
NUP188-208	ENST00000491502	CENPE	Q02224	2701 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	SLC35F4	A4IF30	521 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	HSPB2	A8KAH6	182 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502		H7C1C5	153 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502		J3QRE1	110 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	SMAD9	O15198	467 aa	Known RBP	11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	INMT	O95050	263 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	PTH	P01270	115 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	TACSTD2	P09758	323 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	HSMCR30	P0CW71	290 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	COX6B1	P14854	86 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	ZNF823	P16415	610 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	GRN	P28799	593 aa	Known RBP	11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	ETV1	P50549	477 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	SUCLG1	P53597	346 aa	Known RBP	11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	SH3BGR	P55822	239 aa	Predicted RBP	11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	CLDN17	P56750	224 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	TAS2R43	P59537	309 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	LCN6	P62502	163 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	BDH1	Q02338	343 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	SRY	Q05066	204 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	RASGEF1B	Q0VAM2	473 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	MLLT11	Q13015	90 aa	Predicted RBP	11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	HSPB2	Q16082	182 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	ARMCX4	Q5H9R4	360 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	OR6V1	Q8N148	313 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	RPRML	Q8N4K4	120 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	ZNF454	Q8N9F8	522 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	NOXO1	Q8NFA2	376 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	OR6N1	Q8NGY5	312 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	SNX33	Q8WV41	574 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	ASB17	Q8WXJ9	295 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	MARVELD3	Q96A59	401 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	WDYHV1	Q96HA8	205 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	TXNDC15	Q96J42	360 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	MRPL13	Q9BYD1	178 aa	Known RBP	11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	SRXN1	Q9BYN0	137 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	MED29	Q9NX70	200 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	CAMK2A	Q9UQM7	478 aa		11.96	□□□□□ -0.49
NUP188-208	ENST00000491502	ZNF175	Q9Y473	711 aa		11.96	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms