RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 ITGA2P17301 1181 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 CCNOP22674 350 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 GIFP27352 417 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 GCH1P30793 250 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 RPL4P36578 427 aaKnown RBP14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 KLF3P57682 345 aaPredicted RBP14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 CTXN1P60606 82 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 RPL27P61353 136 aaKnown RBP14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 MYBPC1Q00872 1141 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 HIST3H3Q16695 136 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 PCGF3Q3KNV8 242 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 MYPOPQ86VE0 399 aaPredicted RBP14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 LRRC18Q8N456 261 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 ICA1LQ8NDH6 482 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 ZNF519Q8TB69 540 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 SYNPRQ8TBG9 265 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 ACOT11Q8WXI4 607 aaPredicted RBP14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 TMEM158Q8WZ71 300 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 RDH5Q92781 318 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 CCT8L2Q96SF2 557 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 SYT3Q9BQG1 590 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 MRPL13Q9BYD1 178 aaKnown RBP14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 MRPL37Q9BZE1 423 aaKnown RBP14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 BPESC1Q9GZL8 116 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 ADA2Q9NZK5 511 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 GRHPRQ9UBQ7 328 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 A4GNTQ9UNA3 340 aa14.28□□□□□ -0.12
PDLIM2-217ENST00000491330 TPD52L2O43399 206 aaKnown RBP14.27□□□□□ -0.13
PDLIM2-217ENST00000491330 SNAP29O95721 258 aa14.27□□□□□ -0.13
PDLIM2-217ENST00000491330 SERPINA1P01009 418 aa14.27□□□□□ -0.13
PDLIM2-217ENST00000491330 ZNF16P17020 682 aaPredicted RBP14.27□□□□□ -0.13
PDLIM2-217ENST00000491330 GDI2P50395 445 aaKnown RBP14.27□□□□□ -0.13
PDLIM2-217ENST00000491330 ARHGDIAP52565 204 aa14.27□□□□□ -0.13
PDLIM2-217ENST00000491330 TOP3AQ13472 1001 aaPredicted RBP14.27□□□□□ -0.13
PDLIM2-217ENST00000491330 LAPTM4AQ15012 233 aa14.27□□□□□ -0.13
PDLIM2-217ENST00000491330 C10orf128Q5T292 105 aa14.27□□□□□ -0.13
PDLIM2-217ENST00000491330 GLYATQ6IB77 296 aa14.27□□□□□ -0.13
PDLIM2-217ENST00000491330 TSPYL5Q86VY4 417 aaPredicted RBP14.27□□□□□ -0.13
PDLIM2-217ENST00000491330 CPEB3Q8NE35 698 aaKnown RBP14.27□□□□□ -0.13
PDLIM2-217ENST00000491330 WACQ9BTA9 647 aa14.27□□□□□ -0.13
PDLIM2-217ENST00000491330 ZNF416Q9BWM5 594 aa14.27□□□□□ -0.13
PDLIM2-217ENST00000491330 TPK1Q9H3S4 243 aa14.27□□□□□ -0.13
PDLIM2-217ENST00000491330 CHODLQ9H9P2 273 aa14.27□□□□□ -0.13
PDLIM2-217ENST00000491330 C20orf141Q9NUB4 165 aa14.27□□□□□ -0.13
PDLIM2-217ENST00000491330 DCAF13Q9NV06 445 aaKnown RBP14.27□□□□□ -0.13
PDLIM2-217ENST00000491330 TMEM129A0AVI4 362 aa14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 PLSCR5A0PG75 271 aa14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 C12orf71A8MTZ7 269 aa14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 KIAA1324LA8MWY0 1029 aaPredicted RBP14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 AHCYL1O43865 530 aa14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 PATE4P0C8F1 98 aa14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 SRD5A1P18405 259 aa14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 RHCEP18577 417 aa14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 APEX1P27695 318 aaKnown RBP14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 GPR6P46095 362 aaPredicted RBP14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 YAP1P46937 504 aaKnown RBP14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 UCP2P55851 309 aa14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 TMEM33P57088 247 aa14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 SMIM11AP58511 58 aa14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 MRPS11P82912 194 aaKnown RBP14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 FAM209AQ5JX71 171 aa14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 ARMC4Q5T2S8 1044 aa14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 NRMQ8IXM6 262 aa14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 FAM156AQ8NDB6 213 aa14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 OR51A7Q8NH64 312 aa14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 MOSPD2Q8NHP6 518 aa14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 NSMAFQ92636 917 aa14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 HSH2DQ96JZ2 352 aa14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 MUC13Q9H3R2 512 aa14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 ELOVL3Q9HB03 270 aa14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 DECR2Q9NUI1 292 aa14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 RHCGQ9UBD6 479 aa14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 TIMM10BQ9Y5J6 103 aa14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 ENPP4Q9Y6X5 453 aa14.26□□□□□ -0.13
PDLIM2-217ENST00000491330 NSD1Q96L73 2696 aaPredicted RBP14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 A0A096LNT2 108 aa14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 A0A1W2PRQ8 180 aa14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 RNF212BA8MTL3 300 aa14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 FAM157BP0CG42 384 aa14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 ACHEP22303 614 aa14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 STOMP27105 288 aa14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 GYS2P54840 703 aa14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 PRKCDQ05655 676 aa14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 SCGB2A2Q13296 93 aa14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 DGCR6Q14129 220 aa14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 ZNF718Q3SXZ3 478 aa14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 MTX3Q5HYI7 312 aa14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 FAM27BQ5VT28 67 aa14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 VTCN1Q7Z7D3 282 aa14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 LINC01356Q8N9X3 169 aa14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 CCDC197Q8NCU1 140 aa14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 SPATA3Q8NHX4 192 aa14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 MCUR1Q96AQ8 359 aa14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 ZNF75AQ96N20 296 aa14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 SEPHS2Q99611 448 aa14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 HINT3Q9NQE9 182 aaKnown RBP14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 CYSLTR2Q9NS75 346 aa14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 ZNF224Q9NZL3 707 aa14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 TAAR3PQ9P1P4 343 aa14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 AURKCQ9UQB9 309 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms