RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 C4orf47A7E2U8 309 aa17.52■□□□□ 0.4
SNAPC3-206ENST00000490969 ZNF432O94892 652 aa17.52■□□□□ 0.4
SNAPC3-206ENST00000490969 ITGA5P08648 1049 aa17.52■□□□□ 0.4
SNAPC3-206ENST00000490969 ODF4Q2M2E3 257 aa17.52■□□□□ 0.4
SNAPC3-206ENST00000490969 C2orf76Q3KRA6 126 aa17.52■□□□□ 0.4
SNAPC3-206ENST00000490969 DEFB134Q4QY38 66 aa17.52■□□□□ 0.4
SNAPC3-206ENST00000490969 FAM209BQ5JX69 171 aa17.52■□□□□ 0.4
SNAPC3-206ENST00000490969 ARHGAP40Q5TG30 622 aa17.52■□□□□ 0.4
SNAPC3-206ENST00000490969 KIRREL2Q6UWL6 708 aa17.52■□□□□ 0.4
SNAPC3-206ENST00000490969 TMEM229BQ8NBD8 167 aa17.52■□□□□ 0.4
SNAPC3-206ENST00000490969 PAQR8Q8TEZ7 354 aa17.52■□□□□ 0.4
SNAPC3-206ENST00000490969 PMM1Q92871 262 aa17.52■□□□□ 0.4
SNAPC3-206ENST00000490969 TSSK2Q96PF2 358 aa17.52■□□□□ 0.4
SNAPC3-206ENST00000490969 ATG5Q9H1Y0 275 aa17.52■□□□□ 0.4
SNAPC3-206ENST00000490969 NUP210LQ5VU65 1888 aa17.52■□□□□ 0.39
SNAPC3-206ENST00000490969 HLA-AP01891 365 aaKnown RBP17.52■□□□□ 0.39
SNAPC3-206ENST00000490969 APODP05090 189 aa17.52■□□□□ 0.39
SNAPC3-206ENST00000490969 TLX1P31314 330 aaPredicted RBP17.52■□□□□ 0.39
SNAPC3-206ENST00000490969 PNLIPRP2P54317 469 aa17.52■□□□□ 0.39
SNAPC3-206ENST00000490969 PLEKHN1Q494U1 663 aaPredicted RBP17.52■□□□□ 0.39
SNAPC3-206ENST00000490969 ULK3Q6PHR2 472 aa17.52■□□□□ 0.39
SNAPC3-206ENST00000490969 OR2G2Q8NGZ5 317 aa17.52■□□□□ 0.39
SNAPC3-206ENST00000490969 NANPQ8TBE9 248 aa17.52■□□□□ 0.39
SNAPC3-206ENST00000490969 GPR148Q8TDV2 347 aa17.52■□□□□ 0.39
SNAPC3-206ENST00000490969 ARL11Q969Q4 196 aa17.52■□□□□ 0.39
SNAPC3-206ENST00000490969 FAM3DQ96BQ1 224 aa17.52■□□□□ 0.39
SNAPC3-206ENST00000490969 ZBTB8AQ96BR9 441 aa17.52■□□□□ 0.39
SNAPC3-206ENST00000490969 SEH1LQ96EE3 360 aa17.52■□□□□ 0.39
SNAPC3-206ENST00000490969 CRB3Q9BUF7 120 aa17.52■□□□□ 0.39
SNAPC3-206ENST00000490969 COMMD4Q9H0A8 199 aa17.52■□□□□ 0.39
SNAPC3-206ENST00000490969 C1QTNF3-AMACRE9PGA6 284 aa17.51■□□□□ 0.39
SNAPC3-206ENST00000490969 SULT1C2O00338 296 aa17.51■□□□□ 0.39
SNAPC3-206ENST00000490969 FBXO45P0C2W1 286 aa17.51■□□□□ 0.39
SNAPC3-206ENST00000490969 CDKN2AP42771 156 aaKnown RBP17.51■□□□□ 0.39
SNAPC3-206ENST00000490969 PDZK1IP1Q13113 114 aa17.51■□□□□ 0.39
SNAPC3-206ENST00000490969 SMAD2Q15796 467 aaKnown RBP17.51■□□□□ 0.39
SNAPC3-206ENST00000490969 INO80EQ8NBZ0 244 aaPredicted RBP17.51■□□□□ 0.39
SNAPC3-206ENST00000490969 CNTNAP3BQ96NU0 1288 aa17.51■□□□□ 0.39
SNAPC3-206ENST00000490969 ULBP3Q9BZM4 244 aa17.51■□□□□ 0.39
SNAPC3-206ENST00000490969 IKZF2Q9UKS7 526 aa17.51■□□□□ 0.39
SNAPC3-206ENST00000490969 DAPP1Q9UN19 280 aa17.51■□□□□ 0.39
SNAPC3-206ENST00000490969 A0A087WV62 115 aa17.51■□□□□ 0.39
SNAPC3-206ENST00000490969 LOC100289279A0A1B0GTE1 492 aa17.51■□□□□ 0.39
SNAPC3-206ENST00000490969 TMEM200CA6NKL6 621 aa17.51■□□□□ 0.39
SNAPC3-206ENST00000490969 CFPP27918 469 aa17.51■□□□□ 0.39
SNAPC3-206ENST00000490969 MAP3K8P41279 467 aa17.51■□□□□ 0.39
SNAPC3-206ENST00000490969 RAB11BQ15907 218 aa17.51■□□□□ 0.39
SNAPC3-206ENST00000490969 ISXQ2M1V0 245 aa17.51■□□□□ 0.39
SNAPC3-206ENST00000490969 SERINC2Q96SA4 455 aa17.51■□□□□ 0.39
SNAPC3-206ENST00000490969 CAPN10Q9HC96 672 aa17.51■□□□□ 0.39
SNAPC3-206ENST00000490969 PLEKHA6Q9Y2H5 1048 aa17.51■□□□□ 0.39
SNAPC3-206ENST00000490969 A0A0C4DFX4 3053 aa17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 RAD1O60671 282 aa17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 ALOX12BO75342 701 aa17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 HEXAP06865 529 aa17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 ENPP2Q13822 863 aa17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 HYAL4Q2M3T9 481 aa17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 PRAMEF17Q5VTA0 474 aa17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 AGBL4Q5VU57 503 aa17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 ZCCHC12Q6PEW1 402 aa17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 OR5AP2Q8NGF4 316 aa17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 MCHR2Q969V1 340 aa17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 EDEM2Q9BV94 578 aa17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 SLC22A11Q9NSA0 550 aa17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 A0A1W2PP55 124 aa17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 FABP1P07148 127 aa17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 ZNF735P0CB33 412 aa17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 LIPCP11150 499 aa17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 CD79AP11912 226 aa17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 PRKXP51817 358 aa17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 SEC11CQ9BY50 192 aa17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 PRO3102Q9H379 93 aa17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 TREM1Q9NP99 234 aa17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 MBNL1Q9NR56 388 aaKnown RBP17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 SLC17A5Q9NRA2 495 aa17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 POLE3Q9NRF9 147 aa17.5■□□□□ 0.39
SNAPC3-206ENST00000490969 TMEM212A6NML5 194 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 SGCEO43556 437 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 PTGFRP43088 359 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 GPR143P51810 404 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 CST6Q15828 149 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 SCGB2B2Q4G0G5 96 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 SKA3Q8IX90 412 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 OR4A4PQ8NGN8 299 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 TEX101Q9BY14 249 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 TMEM231Q9H6L2 316 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 TMEM100Q9NV29 134 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 SLC22A7Q9Y694 548 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 FAM25EA8MYX2 175 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 SLC17A2O00624 439 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 B3GALT2O43825 422 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 RDH16O75452 317 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 SLC35G6P0C7Q6 338 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 ABOP16442 354 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 RPS15AP62244 130 aaKnown RBP17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 TSC22D1Q15714 1073 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 TMEM196Q5HYL7 178 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 NDUFAF7Q7L592 441 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 JAZF1Q86VZ6 243 aa17.49■□□□□ 0.39
SNAPC3-206ENST00000490969 CDC20BQ86Y33 519 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms