RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 ZNF823P16415 610 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 MSR1P21757 451 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 GNLYP22749 145 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 PYCR1P32322 319 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 ATP6V1E1P36543 226 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 CHN2P52757 468 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 GABARAPL2P60520 117 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 LSM6P62312 80 aaKnown RBP11.67□□□□□ -0.54
SNX12-205ENST00000490561 KCNMB1Q16558 191 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 CEACAM16Q2WEN9 425 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 PHYHD1Q5SRE7 291 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 LINC01590Q5TEZ4 76 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 ZNF627Q7L945 461 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 BCDIN3DQ7Z5W3 292 aaKnown RBP11.67□□□□□ -0.54
SNX12-205ENST00000490561 DPPA2Q7Z7J5 298 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 C1orf162Q8NEQ5 155 aaPredicted RBP11.67□□□□□ -0.54
SNX12-205ENST00000490561 BPIFB6Q8NFQ5 453 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 PRR7Q8TB68 274 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 RNFT2Q96EX2 444 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 LRRC46Q96FV0 321 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 INTS14Q96SY0 518 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 FOXB1Q99853 325 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 USB1Q9BQ65 265 aaKnown RBP11.67□□□□□ -0.54
SNX12-205ENST00000490561 KCNN2Q9H2S1 579 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 SEC61A2Q9H9S3 476 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 SIAEQ9HAT2 523 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 TMEM38BQ9NVV0 291 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 PRSS50Q9UI38 385 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 ERRFI1Q9UJM3 462 aaPredicted RBP11.67□□□□□ -0.54
SNX12-205ENST00000490561 UGT2A1Q9Y4X1 527 aa11.67□□□□□ -0.54
SNX12-205ENST00000490561 PHF3Q92576 2039 aaKnown RBP11.67□□□□□ -0.54
SNX12-205ENST00000490561 DOCK7Q96N67 2140 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 IGKV1D-43A0A0B4J1Z2 117 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 PHYHO14832 338 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 LRRTM2O43300 516 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 MRPS14O60783 128 aaKnown RBP11.66□□□□□ -0.54
SNX12-205ENST00000490561 FADS2O95864 444 aaKnown RBP11.66□□□□□ -0.54
SNX12-205ENST00000490561 IGHV3-9P01782 118 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 GAAP10253 952 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 HOXB1P14653 301 aaPredicted RBP11.66□□□□□ -0.54
SNX12-205ENST00000490561 COX5AP20674 150 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 AGAP20933 346 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 BMP5P22003 454 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 PAX7P23759 505 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 SLC15A1P46059 708 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 NUDT6P53370 316 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 ACTC1P68032 377 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 ACTA1P68133 377 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 IGFBP7Q16270 282 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 SMN1Q16637 294 aaKnown RBP11.66□□□□□ -0.54
SNX12-205ENST00000490561 TEX30Q5JUR7 227 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 OR7E24Q6IFN5 339 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 UGT2A3Q6UWM9 527 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 SHFQ7M4L6 423 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 SLC16A9Q7RTY1 509 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.66□□□□□ -0.54
SNX12-205ENST00000490561 FJX1Q86VR8 437 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 CCDC36Q8IYA8 594 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 ZNF454Q8N9F8 522 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 ZNF610Q8N9Z0 462 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 ZNF540Q8NDQ6 660 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 SLC26A10Q8NG04 563 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 OR51L1Q8NGJ5 315 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 KISS1RQ969F8 398 aaPredicted RBP11.66□□□□□ -0.54
SNX12-205ENST00000490561 MYDGFQ969H8 173 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 ZMYND19Q96E35 227 aaPredicted RBP11.66□□□□□ -0.54
SNX12-205ENST00000490561 MRPL48Q96GC5 212 aaKnown RBP11.66□□□□□ -0.54
SNX12-205ENST00000490561 BOD1Q96IK1 185 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 HDHD5Q9BXW7 423 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 YIPF3Q9GZM5 350 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 POLE4Q9NR33 117 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 INPP5EQ9NRR6 644 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 ELOVL5Q9NYP7 299 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 JKAMPQ9P055 326 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 AASSQ9UDR5 926 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 PSORS1C1Q9UIG5 152 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 EXOGQ9Y2C4 368 aaKnown RBP11.66□□□□□ -0.54
SNX12-205ENST00000490561 TMEM14AQ9Y6G1 99 aa11.66□□□□□ -0.54
SNX12-205ENST00000490561 ZGRF1Q86YA3 2104 aa11.65□□□□□ -0.54
SNX12-205ENST00000490561 A8MXE2 369 aa11.65□□□□□ -0.54
SNX12-205ENST00000490561 EEF1E1-BLOC1S5C9J1V9 151 aa11.65□□□□□ -0.54
SNX12-205ENST00000490561 EEF1E1O43324 174 aaKnown RBP11.65□□□□□ -0.54
SNX12-205ENST00000490561 CST2P09228 141 aa11.65□□□□□ -0.54
SNX12-205ENST00000490561 SBK2P0C263 348 aa11.65□□□□□ -0.54
SNX12-205ENST00000490561 OR8G3PP0DMU2 310 aa11.65□□□□□ -0.54
SNX12-205ENST00000490561 CRHBPP24387 322 aa11.65□□□□□ -0.54
SNX12-205ENST00000490561 EDNRAP25101 427 aa11.65□□□□□ -0.54
SNX12-205ENST00000490561 DCKP27707 260 aa11.65□□□□□ -0.54
SNX12-205ENST00000490561 ENTPD1P49961 510 aa11.65□□□□□ -0.54
SNX12-205ENST00000490561 PCBD1P61457 104 aa11.65□□□□□ -0.54
SNX12-205ENST00000490561 ARF1P84077 181 aaKnown RBP11.65□□□□□ -0.54
SNX12-205ENST00000490561 ETFDHQ16134 617 aa11.65□□□□□ -0.54
SNX12-205ENST00000490561 SGCAQ16586 387 aa11.65□□□□□ -0.54
SNX12-205ENST00000490561 KCTD21Q4G0X4 260 aa11.65□□□□□ -0.54
SNX12-205ENST00000490561 FAM27BQ5VT28 67 aa11.65□□□□□ -0.54
SNX12-205ENST00000490561 LAIR2Q6ISS4 152 aa11.65□□□□□ -0.54
SNX12-205ENST00000490561 ANKRD16Q6P6B7 361 aa11.65□□□□□ -0.54
SNX12-205ENST00000490561 ZNF813Q6ZN06 617 aa11.65□□□□□ -0.54
SNX12-205ENST00000490561 LINGO2Q7L985 606 aa11.65□□□□□ -0.54
SNX12-205ENST00000490561 SSX8Q7RTT4 187 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms