RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 SDHCQ99643 169 aaPredicted RBP17.22■□□□□ 0.35
CCM2-216ENST00000488727 ZNF175Q9Y473 711 aa17.22■□□□□ 0.35
CCM2-216ENST00000488727 MYO18BQ8IUG5 2567 aa17.22■□□□□ 0.35
CCM2-216ENST00000488727 MBD3L4A6NDZ8 208 aaPredicted RBP17.21■□□□□ 0.35
CCM2-216ENST00000488727 MBD3L3A6NE82 208 aaPredicted RBP17.21■□□□□ 0.35
CCM2-216ENST00000488727 MBD3L5A6NJ08 208 aaPredicted RBP17.21■□□□□ 0.35
CCM2-216ENST00000488727 RIIAD1A6NNX1 92 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 ZNF814B7Z6K7 855 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 LRRN3E7EW58 273 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 SMAD9O15198 467 aaKnown RBP17.21■□□□□ 0.35
CCM2-216ENST00000488727 SLC2A5P22732 501 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 ATP6V1E1P36543 226 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 OR2B6P58173 313 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 LTBQ06643 244 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 FAM69AQ5T7M9 428 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 SLC37A3Q8NCC5 494 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 OR51G2Q8NGK0 314 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 MBD3L2Q8NHZ7 208 aaPredicted RBP17.21■□□□□ 0.35
CCM2-216ENST00000488727 WNT2BQ93097 391 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 TMEM203Q969S6 136 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 SLC19A3Q9BZV2 496 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 MCCC2Q9HCC0 563 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 TIGARQ9NQ88 270 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 MCTS1Q9ULC4 181 aaKnown RBP17.21■□□□□ 0.35
CCM2-216ENST00000488727 CMAHPQ9Y471 501 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 PCNX1Q96RV3 2341 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 NCOA6Q14686 2063 aaPredicted RBP17.21■□□□□ 0.35
CCM2-216ENST00000488727 TRAV27A0A087WT01 109 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 A0A1B0GUH1 482 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 HLA-DPB1P04440 258 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 GTF2E2P29084 291 aaKnown RBP17.21■□□□□ 0.35
CCM2-216ENST00000488727 PMPCAQ10713 525 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 ZNF362Q5T0B9 420 aaPredicted RBP17.21■□□□□ 0.35
CCM2-216ENST00000488727 OAFQ86UD1 273 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 POC5Q8NA72 575 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 MFSD8Q8NHS3 518 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 PTP4A1Q93096 173 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 SLC25A36Q96CQ1 311 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 ITPKCQ96DU7 683 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 MOGAT1Q96PD6 335 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 HCAR1Q9BXC0 346 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 MED20Q9H944 212 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 POLE4Q9NR33 117 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 HAO2Q9NYQ3 351 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 PLEKHB1Q9UF11 243 aaPredicted RBP17.21■□□□□ 0.35
CCM2-216ENST00000488727 ERRFI1Q9UJM3 462 aaPredicted RBP17.21■□□□□ 0.35
CCM2-216ENST00000488727 V9GYH0 126 aa17.21■□□□□ 0.35
CCM2-216ENST00000488727 DIDO1Q9BTC0 2240 aaKnown RBP17.2■□□□□ 0.34
CCM2-216ENST00000488727 HTR3EA5X5Y0 456 aa17.2■□□□□ 0.34
CCM2-216ENST00000488727 C12orf71A8MTZ7 269 aa17.2■□□□□ 0.34
CCM2-216ENST00000488727 RAMP1O60894 148 aa17.2■□□□□ 0.34
CCM2-216ENST00000488727 FZD7O75084 574 aa17.2■□□□□ 0.34
CCM2-216ENST00000488727 SYNGR4O95473 234 aa17.2■□□□□ 0.34
CCM2-216ENST00000488727 BGLAPP02818 100 aa17.2■□□□□ 0.34
CCM2-216ENST00000488727 ZNF3P17036 446 aa17.2■□□□□ 0.34
CCM2-216ENST00000488727 SDC2P34741 201 aa17.2■□□□□ 0.34
CCM2-216ENST00000488727 AGFG1P52594 562 aaKnown RBP17.2■□□□□ 0.34
CCM2-216ENST00000488727 DEFA1P59665 94 aa17.2■□□□□ 0.34
CCM2-216ENST00000488727 DEFA3P59666 94 aa17.2■□□□□ 0.34
CCM2-216ENST00000488727 SLC35A1P78382 337 aa17.2■□□□□ 0.34
CCM2-216ENST00000488727 H3F3AP84243 136 aa17.2■□□□□ 0.34
CCM2-216ENST00000488727 HNRNPA0Q13151 305 aaKnown RBP17.2■□□□□ 0.34
CCM2-216ENST00000488727 SLC35F1Q5T1Q4 408 aa17.2■□□□□ 0.34
CCM2-216ENST00000488727 NAXEQ8NCW5 288 aa17.2■□□□□ 0.34
CCM2-216ENST00000488727 RNF128Q8TEB7 428 aa17.2■□□□□ 0.34
CCM2-216ENST00000488727 AP3S1Q92572 193 aa17.2■□□□□ 0.34
CCM2-216ENST00000488727 CCDC120Q96HB5 630 aa17.2■□□□□ 0.34
CCM2-216ENST00000488727 TM9SF2Q99805 663 aa17.2■□□□□ 0.34
CCM2-216ENST00000488727 KATNB1Q9BVA0 655 aa17.2■□□□□ 0.34
CCM2-216ENST00000488727 ZNF229Q9UJW7 825 aa17.2■□□□□ 0.34
CCM2-216ENST00000488727 FLNCQ14315 2725 aa17.2■□□□□ 0.34
CCM2-216ENST00000488727 BOLA2-SMG1P6H3BVE0 249 aa17.19■□□□□ 0.34
CCM2-216ENST00000488727 DNPH1O43598 174 aa17.19■□□□□ 0.34
CCM2-216ENST00000488727 OR2T1O43869 369 aa17.19■□□□□ 0.34
CCM2-216ENST00000488727 AKR7A3O95154 331 aa17.19■□□□□ 0.34
CCM2-216ENST00000488727 PPP1R3DO95685 299 aa17.19■□□□□ 0.34
CCM2-216ENST00000488727 IGF2P01344 180 aa17.19■□□□□ 0.34
CCM2-216ENST00000488727 IFNGP01579 166 aa17.19■□□□□ 0.34
CCM2-216ENST00000488727 CLEC2LP0C7M8 214 aa17.19■□□□□ 0.34
CCM2-216ENST00000488727 TIMP3P35625 211 aa17.19■□□□□ 0.34
CCM2-216ENST00000488727 CAPZA2P47755 286 aa17.19■□□□□ 0.34
CCM2-216ENST00000488727 ADORA2A-AS1P86434 159 aa17.19■□□□□ 0.34
CCM2-216ENST00000488727 GALEQ14376 348 aa17.19■□□□□ 0.34
CCM2-216ENST00000488727 FCRLAQ7L513 359 aa17.19■□□□□ 0.34
CCM2-216ENST00000488727 TMEM99Q8N816 258 aa17.19■□□□□ 0.34
CCM2-216ENST00000488727 OR51A7Q8NH64 312 aa17.19■□□□□ 0.34
CCM2-216ENST00000488727 ABHD3Q8WU67 409 aa17.19■□□□□ 0.34
CCM2-216ENST00000488727 OTULINQ96BN8 352 aa17.19■□□□□ 0.34
CCM2-216ENST00000488727 SGTBQ96EQ0 304 aa17.19■□□□□ 0.34
CCM2-216ENST00000488727 TNFRSF13CQ96RJ3 184 aa17.19■□□□□ 0.34
CCM2-216ENST00000488727 ALG8Q9BVK2 526 aa17.19■□□□□ 0.34
CCM2-216ENST00000488727 RNF122Q9H9V4 155 aa17.19■□□□□ 0.34
CCM2-216ENST00000488727 NDUFB2O95178 105 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 CD53P19397 219 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 CEACAM8P31997 349 aaPredicted RBP17.18■□□□□ 0.34
CCM2-216ENST00000488727 MXD1Q05195 221 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 POU4F2Q12837 409 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 ZNF74Q16587 644 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 P4HA3Q7Z4N8 544 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 LAX1Q8IWV1 398 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms