RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 OR51M1Q9H341 326 aa2.54□□□□□ -2
RBM28-207ENST00000488249 TUBB1Q9H4B7 451 aa2.54□□□□□ -2
RBM28-207ENST00000488249 IKZF5Q9H5V7 419 aa2.54□□□□□ -2
RBM28-207ENST00000488249 GPN2Q9H9Y4 310 aaPredicted RBP2.54□□□□□ -2
RBM28-207ENST00000488249 GNB4Q9HAV0 340 aa2.54□□□□□ -2
RBM28-207ENST00000488249 VCX3AQ9NNX9 186 aa2.54□□□□□ -2
RBM28-207ENST00000488249 ABCB9Q9NP78 766 aa2.54□□□□□ -2
RBM28-207ENST00000488249 SLC17A5Q9NRA2 495 aa2.54□□□□□ -2
RBM28-207ENST00000488249 DCAF13Q9NV06 445 aaKnown RBP2.54□□□□□ -2
RBM28-207ENST00000488249 PARVAQ9NVD7 372 aa2.54□□□□□ -2
RBM28-207ENST00000488249 GPATCH2LQ9NWQ4 482 aa2.54□□□□□ -2
RBM28-207ENST00000488249 RMND1Q9NWS8 449 aa2.54□□□□□ -2
RBM28-207ENST00000488249 C1orf109Q9NX04 203 aa2.54□□□□□ -2
RBM28-207ENST00000488249 TECRQ9NZ01 308 aaKnown RBP2.54□□□□□ -2
RBM28-207ENST00000488249 FZR1Q9UM11 496 aa2.54□□□□□ -2
RBM28-207ENST00000488249 NPIPA1Q9UND3 350 aa2.54□□□□□ -2
RBM28-207ENST00000488249 ETV7Q9Y603 341 aa2.54□□□□□ -2
RBM28-207ENST00000488249 CDH10Q9Y6N8 788 aa2.54□□□□□ -2
RBM28-207ENST00000488249 V9GYY9 64 aa2.54□□□□□ -2
RBM28-207ENST00000488249 AQRO60306 1485 aaKnown RBP eCLIP2.53□□□□□ -2
RBM28-207ENST00000488249 EIF3AQ14152 1382 aaKnown RBP2.53□□□□□ -2
RBM28-207ENST00000488249 RFX7Q2KHR2 1363 aa2.53□□□□□ -2
RBM28-207ENST00000488249 USP47Q96K76 1375 aa2.53□□□□□ -2
RBM28-207ENST00000488249 CCDC171Q6TFL3 1326 aa2.53□□□□□ -2
RBM28-207ENST00000488249 ADGRA3Q8IWK6 1321 aa2.53□□□□□ -2
RBM28-207ENST00000488249 TRBV9A0A0B4J1U6 114 aa2.53□□□□□ -2
RBM28-207ENST00000488249 IGHV3-20A0A0C4DH32 117 aa2.53□□□□□ -2
RBM28-207ENST00000488249 IGHV3-38A0A0C4DH36 116 aa2.53□□□□□ -2
RBM28-207ENST00000488249 IQCMA0A1B0GVH7 501 aa2.53□□□□□ -2
RBM28-207ENST00000488249 PSMB11A5LHX3 300 aa2.53□□□□□ -2
RBM28-207ENST00000488249 EFCAB10A6NFE3 127 aa2.53□□□□□ -2
RBM28-207ENST00000488249 FAM74A7A6NL05 159 aa2.53□□□□□ -2
RBM28-207ENST00000488249 VSTM2BA6NLU5 285 aa2.53□□□□□ -2
RBM28-207ENST00000488249 ZNF729A6NN14 1252 aaPredicted RBP2.53□□□□□ -2
RBM28-207ENST00000488249 SRRM4A7MD48 611 aaKnown RBP2.53□□□□□ -2
RBM28-207ENST00000488249 LMO7DNF2Z398 122 aa2.53□□□□□ -2
RBM28-207ENST00000488249 SULT1C2O00338 296 aa2.53□□□□□ -2
RBM28-207ENST00000488249 ACOX3O15254 700 aa2.53□□□□□ -2
RBM28-207ENST00000488249 BIRC5O15392 142 aa2.53□□□□□ -2
RBM28-207ENST00000488249 MAGEB4O15481 346 aaPredicted RBP2.53□□□□□ -2
RBM28-207ENST00000488249 EFNA2O43921 213 aa2.53□□□□□ -2
RBM28-207ENST00000488249 RAMP3O60896 148 aa2.53□□□□□ -2
RBM28-207ENST00000488249 CTNSO60931 367 aa2.53□□□□□ -2
RBM28-207ENST00000488249 SRP72O76094 671 aaKnown RBP2.53□□□□□ -2
RBM28-207ENST00000488249 DIRAS1O95057 198 aa2.53□□□□□ -2
RBM28-207ENST00000488249 LRATO95237 230 aa2.53□□□□□ -2
RBM28-207ENST00000488249 UTS2O95399 124 aa2.53□□□□□ -2
RBM28-207ENST00000488249 SERPINA1P01009 418 aa2.53□□□□□ -2
RBM28-207ENST00000488249 HLA-HP01893 362 aa2.53□□□□□ -2
RBM28-207ENST00000488249 ALDOBP05062 364 aa2.53□□□□□ -2
RBM28-207ENST00000488249 SERPINA5P05154 406 aa2.53□□□□□ -2
RBM28-207ENST00000488249 KLK1P06870 262 aa2.53□□□□□ -2
RBM28-207ENST00000488249 ANXA3P12429 323 aa2.53□□□□□ -2
RBM28-207ENST00000488249 NQO1P15559 274 aaKnown RBP2.53□□□□□ -2
RBM28-207ENST00000488249 C4BPBP20851 252 aa2.53□□□□□ -2
RBM28-207ENST00000488249 IDSP22304 550 aa2.53□□□□□ -2
RBM28-207ENST00000488249 HMGB2P26583 209 aaKnown RBP2.53□□□□□ -2
RBM28-207ENST00000488249 GPR183P32249 361 aa2.53□□□□□ -2
RBM28-207ENST00000488249 DDOSTP39656 456 aa2.53□□□□□ -2
RBM28-207ENST00000488249 RPL13AP40429 203 aaKnown RBP2.53□□□□□ -2
RBM28-207ENST00000488249 NBL1P41271 181 aa2.53□□□□□ -2
RBM28-207ENST00000488249 MAGEA3P43357 314 aa2.53□□□□□ -2
RBM28-207ENST00000488249 CX3CR1P49238 355 aa2.53□□□□□ -2
RBM28-207ENST00000488249 CDK9P50750 372 aaKnown RBP2.53□□□□□ -2
RBM28-207ENST00000488249 SGSHP51688 502 aa2.53□□□□□ -2
RBM28-207ENST00000488249 OSTNP61366 133 aa2.53□□□□□ -2
RBM28-207ENST00000488249 MRPS22P82650 360 aaKnown RBP2.53□□□□□ -2
RBM28-207ENST00000488249 PAX2Q02962 417 aa2.53□□□□□ -2
RBM28-207ENST00000488249 CD300CQ08708 224 aa2.53□□□□□ -2
RBM28-207ENST00000488249 C2orf80Q0P641 193 aa2.53□□□□□ -2
RBM28-207ENST00000488249 ZP4Q12836 540 aa2.53□□□□□ -2
RBM28-207ENST00000488249 KLRB1Q12918 225 aa2.53□□□□□ -2
RBM28-207ENST00000488249 RIGQ13278 110 aa2.53□□□□□ -2
RBM28-207ENST00000488249 GRB7Q14451 532 aa2.53□□□□□ -2
RBM28-207ENST00000488249 SMCO1Q147U7 214 aa2.53□□□□□ -2
RBM28-207ENST00000488249 EMC2Q15006 297 aa2.53□□□□□ -2
RBM28-207ENST00000488249 TAF1AQ15573 450 aaPredicted RBP2.53□□□□□ -2
RBM28-207ENST00000488249 OR1C1Q15619 314 aa2.53□□□□□ -2
RBM28-207ENST00000488249 ZNF77Q15935 545 aa2.53□□□□□ -2
RBM28-207ENST00000488249 FAM74A3Q4VXF1 159 aa2.53□□□□□ -2
RBM28-207ENST00000488249 TP53I3Q53FA7 332 aa2.53□□□□□ -2
RBM28-207ENST00000488249 AKIRIN2Q53H80 203 aa2.53□□□□□ -2
RBM28-207ENST00000488249 GCSAMLQ5JQS6 135 aa2.53□□□□□ -2
RBM28-207ENST00000488249 TEX30Q5JUR7 227 aa2.53□□□□□ -2
RBM28-207ENST00000488249 TIMM23BQ5SRD1 257 aa2.53□□□□□ -2
RBM28-207ENST00000488249 CCNJQ5T5M9 372 aa2.53□□□□□ -2
RBM28-207ENST00000488249 HES5Q5TA89 166 aa2.53□□□□□ -2
RBM28-207ENST00000488249 OR2G6Q5TZ20 316 aa2.53□□□□□ -2
RBM28-207ENST00000488249 MARC1Q5VT66 337 aa2.53□□□□□ -2
RBM28-207ENST00000488249 C1orf146Q5VVC0 180 aa2.53□□□□□ -2
RBM28-207ENST00000488249 HACD4Q5VWC8 232 aa2.53□□□□□ -2
RBM28-207ENST00000488249 DMKNQ6E0U4 476 aaPredicted RBP2.53□□□□□ -2
RBM28-207ENST00000488249 ENPP6Q6UWR7 440 aa2.53□□□□□ -2
RBM28-207ENST00000488249 CWC27Q6UX04 472 aaKnown RBP2.53□□□□□ -2
RBM28-207ENST00000488249 GCNT7Q6ZNI0 430 aa2.53□□□□□ -2
RBM28-207ENST00000488249 Q6ZSR3 168 aa2.53□□□□□ -2
RBM28-207ENST00000488249 FAM92BQ6ZTR7 304 aa2.53□□□□□ -2
RBM28-207ENST00000488249 LINC00336Q6ZUF6 198 aa2.53□□□□□ -2
RBM28-207ENST00000488249 OR2W3Q7Z3T1 314 aa2.53□□□□□ -2
RBM28-207ENST00000488249 C5orf24Q7Z6I8 188 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms