RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 ACSM5Q6NUN0 579 aa13.07□□□□□ -0.32
TRIM50-203ENST00000488217 HDDC2Q7Z4H3 204 aa13.07□□□□□ -0.32
TRIM50-203ENST00000488217 TMEM239Q8WW34 195 aa13.07□□□□□ -0.32
TRIM50-203ENST00000488217 ASB10Q8WXI3 467 aa13.07□□□□□ -0.32
TRIM50-203ENST00000488217 SGTBQ96EQ0 304 aa13.07□□□□□ -0.32
TRIM50-203ENST00000488217 NPHS2Q9NP85 383 aa13.07□□□□□ -0.32
TRIM50-203ENST00000488217 STX18Q9P2W9 335 aaKnown RBP13.07□□□□□ -0.32
TRIM50-203ENST00000488217 A0A0G2JND7 137 aa13.06□□□□□ -0.32
TRIM50-203ENST00000488217 FBP2O00757 339 aa13.06□□□□□ -0.32
TRIM50-203ENST00000488217 OR5F1O95221 314 aa13.06□□□□□ -0.32
TRIM50-203ENST00000488217 IFNA14P01570 189 aa13.06□□□□□ -0.32
TRIM50-203ENST00000488217 MT-ND5P03915 603 aa13.06□□□□□ -0.32
TRIM50-203ENST00000488217 TSPAN19P0C672 248 aa13.06□□□□□ -0.32
TRIM50-203ENST00000488217 STOMP27105 288 aa13.06□□□□□ -0.32
TRIM50-203ENST00000488217 MRPS34P82930 218 aaKnown RBP13.06□□□□□ -0.32
TRIM50-203ENST00000488217 MVKQ03426 396 aa13.06□□□□□ -0.32
TRIM50-203ENST00000488217 HSF2Q03933 536 aa13.06□□□□□ -0.32
TRIM50-203ENST00000488217 SGCAQ16586 387 aa13.06□□□□□ -0.32
TRIM50-203ENST00000488217 PABPC1L2AQ5JQF8 200 aa13.06□□□□□ -0.32
TRIM50-203ENST00000488217 C10orf128Q5T292 105 aa13.06□□□□□ -0.32
TRIM50-203ENST00000488217 CALHM3Q86XJ0 350 aa13.06□□□□□ -0.32
TRIM50-203ENST00000488217 MEX3DQ86XN8 651 aaKnown RBP13.06□□□□□ -0.32
TRIM50-203ENST00000488217 ICA1LQ8NDH6 482 aa13.06□□□□□ -0.32
TRIM50-203ENST00000488217 OR1J1Q8NGS3 322 aa13.06□□□□□ -0.32
TRIM50-203ENST00000488217 MOSPD2Q8NHP6 518 aa13.06□□□□□ -0.32
TRIM50-203ENST00000488217 PFN4Q8NHR9 129 aa13.06□□□□□ -0.32
TRIM50-203ENST00000488217 TMEM255BQ8WV15 326 aa13.06□□□□□ -0.32
TRIM50-203ENST00000488217 ZFAND2BQ8WV99 257 aa13.06□□□□□ -0.32
TRIM50-203ENST00000488217 LRRC58Q96CX6 371 aa13.06□□□□□ -0.32
TRIM50-203ENST00000488217 SIKE1Q9BRV8 207 aa13.06□□□□□ -0.32
TRIM50-203ENST00000488217 POLR2J2Q9GZM3 115 aaKnown RBP13.06□□□□□ -0.32
TRIM50-203ENST00000488217 POLR2J3Q9H1A7 115 aaKnown RBP13.06□□□□□ -0.32
TRIM50-203ENST00000488217 C20orf141Q9NUB4 165 aa13.06□□□□□ -0.32
TRIM50-203ENST00000488217 EIF3KQ9UBQ5 218 aaKnown RBP13.06□□□□□ -0.32
TRIM50-203ENST00000488217 IGHV1-69-2A0A0G2JMI3 117 aa13.05□□□□□ -0.32
TRIM50-203ENST00000488217 TPD52L2O43399 206 aaKnown RBP13.05□□□□□ -0.32
TRIM50-203ENST00000488217 PLPP2O43688 288 aa13.05□□□□□ -0.32
TRIM50-203ENST00000488217 EDF1O60869 148 aaKnown RBP13.05□□□□□ -0.32
TRIM50-203ENST00000488217 NPPAP01160 153 aa13.05□□□□□ -0.32
TRIM50-203ENST00000488217 THRBP10828 461 aa13.05□□□□□ -0.32
TRIM50-203ENST00000488217 TNFRSF1BP20333 461 aa13.05□□□□□ -0.32
TRIM50-203ENST00000488217 CDAP32320 146 aa13.05□□□□□ -0.32
TRIM50-203ENST00000488217 OR1E2P47887 323 aa13.05□□□□□ -0.32
TRIM50-203ENST00000488217 TSTQ16762 297 aaKnown RBP13.05□□□□□ -0.32
TRIM50-203ENST00000488217 ZNF718Q3SXZ3 478 aa13.05□□□□□ -0.32
TRIM50-203ENST00000488217 RABL3Q5HYI8 236 aa13.05□□□□□ -0.32
TRIM50-203ENST00000488217 THEM4Q5T1C6 240 aa13.05□□□□□ -0.32
TRIM50-203ENST00000488217 AVPI1Q5T686 147 aa13.05□□□□□ -0.32
TRIM50-203ENST00000488217 FAM27BQ5VT28 67 aa13.05□□□□□ -0.32
TRIM50-203ENST00000488217 SHQ1Q6PI26 577 aaKnown RBP13.05□□□□□ -0.32
TRIM50-203ENST00000488217 C12orf54Q6X4T0 127 aa13.05□□□□□ -0.32
TRIM50-203ENST00000488217 TEX29Q8N6K0 151 aa13.05□□□□□ -0.32
TRIM50-203ENST00000488217 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.05□□□□□ -0.32
TRIM50-203ENST00000488217 NOXO1Q8NFA2 376 aa13.05□□□□□ -0.32
TRIM50-203ENST00000488217 ZNF418Q8TF45 676 aaPredicted RBP13.05□□□□□ -0.32
TRIM50-203ENST00000488217 NSMAFQ92636 917 aa13.05□□□□□ -0.32
TRIM50-203ENST00000488217 NMD3Q96D46 503 aaKnown RBP13.05□□□□□ -0.32
TRIM50-203ENST00000488217 ZNF583Q96ND8 569 aa13.05□□□□□ -0.32
TRIM50-203ENST00000488217 RBP7Q96R05 134 aa13.05□□□□□ -0.32
TRIM50-203ENST00000488217 ZNF665Q9H7R5 613 aa13.05□□□□□ -0.32
TRIM50-203ENST00000488217 SMURF2Q9HAU4 748 aa13.05□□□□□ -0.32
TRIM50-203ENST00000488217 CCNB1IP1Q9NPC3 277 aa13.05□□□□□ -0.32
TRIM50-203ENST00000488217 MED31Q9Y3C7 131 aa13.05□□□□□ -0.32
TRIM50-203ENST00000488217 UGT2A1Q9Y4X1 527 aa13.05□□□□□ -0.32
TRIM50-203ENST00000488217 HTR3EA5X5Y0 456 aa13.04□□□□□ -0.32
TRIM50-203ENST00000488217 SHOX2O60902 331 aaPredicted RBP13.04□□□□□ -0.32
TRIM50-203ENST00000488217 MPZL1O95297 269 aa13.04□□□□□ -0.32
TRIM50-203ENST00000488217 SLC2A10O95528 541 aa13.04□□□□□ -0.32
TRIM50-203ENST00000488217 AVPP01185 164 aa13.04□□□□□ -0.32
TRIM50-203ENST00000488217 ZNF32P17041 273 aa13.04□□□□□ -0.32
TRIM50-203ENST00000488217 GCH1P30793 250 aa13.04□□□□□ -0.32
TRIM50-203ENST00000488217 PSG4Q00888 419 aa13.04□□□□□ -0.32
TRIM50-203ENST00000488217 HFEQ30201 348 aa13.04□□□□□ -0.32
TRIM50-203ENST00000488217 SLC25A47Q6Q0C1 308 aa13.04□□□□□ -0.32
TRIM50-203ENST00000488217 UNQ6126/PRO20091Q6UXV3 157 aa13.04□□□□□ -0.32
TRIM50-203ENST00000488217 THSD4Q6ZMP0 1018 aa13.04□□□□□ -0.32
TRIM50-203ENST00000488217 C1orf229Q6ZS94 237 aaPredicted RBP13.04□□□□□ -0.32
TRIM50-203ENST00000488217 USP51Q70EK9 711 aa13.04□□□□□ -0.32
TRIM50-203ENST00000488217 C1orf174Q8IYL3 243 aa13.04□□□□□ -0.32
TRIM50-203ENST00000488217 OR8J3Q8NGG0 315 aa13.04□□□□□ -0.32
TRIM50-203ENST00000488217 C10orf82Q8WW14 230 aa13.04□□□□□ -0.32
TRIM50-203ENST00000488217 HDAC2Q92769 488 aaKnown RBP13.04□□□□□ -0.32
TRIM50-203ENST00000488217 RAB1CQ92928 201 aa13.04□□□□□ -0.32
TRIM50-203ENST00000488217 MARS2Q96GW9 593 aaKnown RBP13.04□□□□□ -0.32
TRIM50-203ENST00000488217 POM121L2Q96KW2 1035 aa13.04□□□□□ -0.32
TRIM50-203ENST00000488217 TXNIPQ9H3M7 391 aa13.04□□□□□ -0.32
TRIM50-203ENST00000488217 PCDHB10Q9UN67 800 aa13.04□□□□□ -0.32
TRIM50-203ENST00000488217 LOC100509620A0A075B734 347 aa13.03□□□□□ -0.32
TRIM50-203ENST00000488217 C5orf49A4QMS7 147 aa13.03□□□□□ -0.32
TRIM50-203ENST00000488217 NPIPB13A6NJU9 1138 aa13.03□□□□□ -0.32
TRIM50-203ENST00000488217 NPIPB4C9JG80 1138 aa13.03□□□□□ -0.32
TRIM50-203ENST00000488217 PNPP00491 289 aa13.03□□□□□ -0.32
TRIM50-203ENST00000488217 GUCA1AP43080 201 aaPredicted RBP13.03□□□□□ -0.32
TRIM50-203ENST00000488217 GDI2P50395 445 aaKnown RBP13.03□□□□□ -0.32
TRIM50-203ENST00000488217 ZNF81P51508 661 aa13.03□□□□□ -0.32
TRIM50-203ENST00000488217 TAF11Q15544 211 aa13.03□□□□□ -0.32
TRIM50-203ENST00000488217 ERICH5Q6P6B1 374 aa13.03□□□□□ -0.32
TRIM50-203ENST00000488217 ALDH16A1Q8IZ83 802 aa13.03□□□□□ -0.32
TRIM50-203ENST00000488217 AKR7LQ8NHP1 331 aa13.03□□□□□ -0.32
TRIM50-203ENST00000488217 CCL17Q92583 94 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms