RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 DCAF13Q9NV06 445 aaKnown RBP9.82□□□□□ -0.84
TRIM56-204ENST00000487252 GAR1Q9NY12 217 aaKnown RBP9.82□□□□□ -0.84
TRIM56-204ENST00000487252 SMPD3Q9NY59 655 aaPredicted RBP9.82□□□□□ -0.84
TRIM56-204ENST00000487252 DNAJB9Q9UBS3 223 aa9.82□□□□□ -0.84
TRIM56-204ENST00000487252 ATP6V1HQ9UI12 483 aa9.82□□□□□ -0.84
TRIM56-204ENST00000487252 BTNL2Q9UIR0 455 aa9.82□□□□□ -0.84
TRIM56-204ENST00000487252 ZNF587BE7ETH6 402 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 H0YAE9 185 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 AHCYL1O43865 530 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 GPR137BO60478 399 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 TPST1O60507 370 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 CLPTM1O96005 669 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 GPX2P18283 190 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 CAPGP40121 348 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 CDKN2CP42773 168 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 GSTM5P46439 218 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 ALDH3B2P48448 385 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 CLK1P49759 484 aaKnown RBP9.81□□□□□ -0.84
TRIM56-204ENST00000487252 SH3BGRP55822 239 aaPredicted RBP9.81□□□□□ -0.84
TRIM56-204ENST00000487252 CD69Q07108 199 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 ACSM2AQ08AH3 577 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 LRRC74AQ0VAA2 488 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 PGS1Q32NB8 556 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 CNPY1Q3B7I2 92 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 SPIN4Q56A73 249 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 ACSM2BQ68CK6 577 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 OR4F3Q6IEY1 312 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 PAQR6Q6TCH4 344 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 AAED1Q7RTV5 226 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 ZNF551Q7Z340 670 aaPredicted RBP9.81□□□□□ -0.84
TRIM56-204ENST00000487252 SERPINA11Q86U17 422 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 ZFP28Q8NHY6 868 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 ADAMTS15Q8TE58 950 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 FAM120BQ96EK7 910 aaKnown RBP9.81□□□□□ -0.84
TRIM56-204ENST00000487252 SLC47A1Q96FL8 570 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 FAM71F1Q96KD3 344 aaPredicted RBP9.81□□□□□ -0.84
TRIM56-204ENST00000487252 EGLN2Q96KS0 407 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 ZNF75AQ96N20 296 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 TSC22D3Q99576 134 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 SEPHS2Q99611 448 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 SPATA9Q9BWV2 254 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 YTHDF1Q9BYJ9 559 aaKnown RBP9.81□□□□□ -0.84
TRIM56-204ENST00000487252 RBM38Q9H0Z9 239 aaKnown RBP9.81□□□□□ -0.84
TRIM56-204ENST00000487252 SIRT3Q9NTG7 399 aaPredicted RBP9.81□□□□□ -0.84
TRIM56-204ENST00000487252 ACER3Q9NUN7 267 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 USE1Q9NZ43 259 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 TANC2Q9HCD6 1990 aa9.81□□□□□ -0.84
TRIM56-204ENST00000487252 RNF103-CHMP3A0A140T963 221 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 GNG14A0A1W2PPG7 69 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 RFXANKO14593 260 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 EI24O14681 340 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 ZNF264O43296 627 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 EIF1BO60739 113 aaKnown RBP9.8□□□□□ -0.84
TRIM56-204ENST00000487252 FKBP2P26885 142 aaKnown RBP9.8□□□□□ -0.84
TRIM56-204ENST00000487252 APOBEC1P41238 236 aaKnown RBP9.8□□□□□ -0.84
TRIM56-204ENST00000487252 MAGEA2P43356 314 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 SLC6A9P48067 706 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 NPRL3Q12980 569 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 HFEQ30201 348 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 CYBRD1Q53TN4 286 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 ERICH5Q6P6B1 374 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 TBPL2Q6SJ96 375 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 MDP1Q86V88 176 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 C10orf111Q8N326 155 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 DHRSXQ8N5I4 330 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 FAM86B1Q8N7N1 296 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 ANKK1Q8NFD2 765 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 TSPAN14Q8NG11 270 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 OR7A2PQ8NGA2 310 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 OR10S1Q8NGN2 331 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 ADAMTS16Q8TE57 1224 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 DACT3Q96B18 629 aaPredicted RBP9.8□□□□□ -0.84
TRIM56-204ENST00000487252 DGCR14Q96DF8 476 aaKnown RBP9.8□□□□□ -0.84
TRIM56-204ENST00000487252 RDH12Q96NR8 316 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 ALKBH3Q96Q83 286 aaPredicted RBP9.8□□□□□ -0.84
TRIM56-204ENST00000487252 PRPF18Q99633 342 aaKnown RBP9.8□□□□□ -0.84
TRIM56-204ENST00000487252 BTBD2Q9BX70 525 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 EBPLQ9BY08 206 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 HOXD1Q9GZZ0 328 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 HINT3Q9NQE9 182 aaKnown RBP9.8□□□□□ -0.84
TRIM56-204ENST00000487252 B3GNT2Q9NY97 397 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 CHRNA9Q9UGM1 479 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 MYRFQ9Y2G1 1151 aa9.8□□□□□ -0.84
TRIM56-204ENST00000487252 IGLV3-9A0A075B6K5 115 aa9.79□□□□□ -0.84
TRIM56-204ENST00000487252 TRAV40A0A0B4J280 105 aa9.79□□□□□ -0.84
TRIM56-204ENST00000487252 RPL36A-HNRNPH2H7BZ11 118 aa9.79□□□□□ -0.84
TRIM56-204ENST00000487252 GTPBP1O00178 669 aaKnown RBP9.79□□□□□ -0.84
TRIM56-204ENST00000487252 TSPAN9O75954 239 aa9.79□□□□□ -0.84
TRIM56-204ENST00000487252 SEMG1P04279 462 aa9.79□□□□□ -0.84
TRIM56-204ENST00000487252 ALPLP05186 524 aa9.79□□□□□ -0.84
TRIM56-204ENST00000487252 TFPIP10646 304 aa9.79□□□□□ -0.84
TRIM56-204ENST00000487252 LAMP1P11279 417 aa9.79□□□□□ -0.84
TRIM56-204ENST00000487252 PPIBP23284 216 aaKnown RBP9.79□□□□□ -0.84
TRIM56-204ENST00000487252 NTSP30990 170 aa9.79□□□□□ -0.84
TRIM56-204ENST00000487252 ALDH3A2P51648 485 aa9.79□□□□□ -0.84
TRIM56-204ENST00000487252 ATP12AP54707 1039 aa9.79□□□□□ -0.84
TRIM56-204ENST00000487252 BPIFB3P59826 476 aa9.79□□□□□ -0.84
TRIM56-204ENST00000487252 RPS23P62266 143 aaKnown RBP9.79□□□□□ -0.84
TRIM56-204ENST00000487252 DBPQ10586 325 aaPredicted RBP9.79□□□□□ -0.84
TRIM56-204ENST00000487252 SKP2Q13309 424 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms