RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 CIB4A0PJX0 185 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 DUXAA6NLW8 204 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 C9JVG2 144 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 SULT2B1O00204 365 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 NDUFS8O00217 210 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 GPR171O14626 319 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 AZIN1O14977 448 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 ANKRD28O15084 1053 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 LSM1O15116 133 aaKnown RBP3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 SMAD9O15198 467 aaKnown RBP3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 ZNF264O43296 627 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 RIPK2O43353 540 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 GLRA3O75311 464 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 SLC22A3O75751 556 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 RAD51DO75771 328 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 FGF4P08620 206 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 KRT16P08779 473 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 IGHV4-31P0DP07 118 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 LAMP1P11279 417 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 NEFHP12036 1026 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 BCKDHAP12694 445 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 CPA3P15088 417 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 SRD5A1P18405 259 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 SDC1P18827 310 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 PTNP21246 168 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 MYF6P23409 242 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 EDNRAP25101 427 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 FKBP2P26885 142 aaKnown RBP3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 CCT5P48643 541 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 CCT3P49368 545 aaKnown RBP3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 CLK1P49759 484 aaKnown RBP3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 FABP6P51161 128 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 ZNF83P51522 516 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 CSNK2A1P68400 391 aaPredicted RBP3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 SQLEQ14534 574 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 LASP1Q14847 261 aaKnown RBP3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 QPRTQ15274 297 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 GABRA6Q16445 453 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 WHAMMP3Q1A5X7 153 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 CCDC153Q494R4 210 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 RFTN2Q52LD8 501 aaPredicted RBP3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 DCST2Q5T1A1 773 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 AP1ARQ63HQ0 302 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 CLEC6AQ6EIG7 209 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 C3orf33Q6P1S2 294 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 SLC22A25Q6T423 547 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 TMPPEQ6ZT21 453 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 SZRD1Q7Z422 152 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 ZNF525Q8N782 197 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 ATG16L2Q8NAA4 619 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 OR2T11Q8NH01 316 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 FBXO30Q8TB52 745 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 TMEM234Q8WY98 164 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 OR5P2Q8WZ92 322 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 ST8SIA1Q92185 356 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 ANP32BQ92688 251 aaKnown RBP3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 APH1AQ96BI3 265 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 MOAP1Q96BY2 351 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 ZNF524Q96C55 264 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 CHMP6Q96FZ7 201 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 TSSK3Q96PN8 268 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 OR5B2Q96R09 309 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 ZNF300Q96RE9 604 aaPredicted RBP3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 SDF2Q99470 211 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 INPP5KQ9BT40 448 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 C19orf24Q9BVV8 132 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 NMUR2Q9GZQ4 415 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 LAT2Q9GZY6 243 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 TUBB1Q9H4B7 451 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 ANKZF1Q9H8Y5 726 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 FKRPQ9H9S5 495 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 SERINC1Q9NRX5 453 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 ACER3Q9NUN7 267 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 TAS2R16Q9NYV7 291 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 EMC3Q9P0I2 261 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 PSMC3IPQ9P2W1 217 aaPredicted RBP3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 BAIAP2L1Q9UHR4 511 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 ATP6V1HQ9UI12 483 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 POU2F3Q9UKI9 436 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 EMCNQ9ULC0 261 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 FAF1Q9UNN5 650 aaPredicted RBP3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 DHDHQ9UQ10 334 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 SLC25A15Q9Y619 301 aa3.42□□□□□ -1.86
SNRNP40-205ENST00000486941 NPIPA5A0A0B4J1W7 369 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 A0A1W2PPM1 405 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 LOC390937A0A1W2PQ73 354 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 SERINC4A6NH21 518 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 CCT8L1PA6NM43 557 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 ZNF716A6NP11 495 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 TMEM114B3SHH9 223 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 NPIPA7E9PJI5 369 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 PDLIM1O00151 329 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 SCAMP2O15127 329 aaKnown RBP3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 PLIN3O60664 434 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 FCMRO60667 390 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 MRPL33O75394 65 aaKnown RBP3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 STX11O75558 287 aa3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 LYPLA1O75608 230 aaPredicted RBP3.41□□□□□ -1.86
SNRNP40-205ENST00000486941 H6PDO95479 791 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms