RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 TMEM246Q9BRR3 403 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 EMC6Q9BV81 110 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 PPA2Q9H2U2 334 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 A4GALTQ9NPC4 353 aa6.78□□□□□ -1.32
XRN1-212ENST00000486211 CGGBP1Q9UFW8 167 aaPredicted RBP6.78□□□□□ -1.32
XRN1-212ENST00000486211 HUWE1Q7Z6Z7 4374 aaKnown RBP6.78□□□□□ -1.32
XRN1-212ENST00000486211 PHYHO14832 338 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 ENSAO43768 121 aaKnown RBP6.77□□□□□ -1.33
XRN1-212ENST00000486211 AKAP8O43823 692 aaKnown RBP6.77□□□□□ -1.33
XRN1-212ENST00000486211 ZNF205O95201 554 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 AHSA1O95433 338 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 OR12D1P0DN82 309 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 HLA-DOBP13765 273 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 RPS4Y1P22090 263 aaKnown RBP6.77□□□□□ -1.33
XRN1-212ENST00000486211 HOXD3P31249 432 aaPredicted RBP6.77□□□□□ -1.33
XRN1-212ENST00000486211 ACAA2P42765 397 aaKnown RBP6.77□□□□□ -1.33
XRN1-212ENST00000486211 MAGEA4P43358 317 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 C2orf54Q08AI8 447 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 ZNF718Q3SXZ3 478 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 WDR25Q64LD2 544 aaPredicted RBP6.77□□□□□ -1.33
XRN1-212ENST00000486211 WDR88Q6ZMY6 472 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 Q6ZR03 302 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 PIWIL3Q7Z3Z3 882 aaKnown RBP6.77□□□□□ -1.33
XRN1-212ENST00000486211 SLC22A24Q8N4F4 322 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 SLC25A40Q8TBP6 338 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 WIPF2Q8TF74 440 aaPredicted RBP6.77□□□□□ -1.33
XRN1-212ENST00000486211 LHX4Q969G2 390 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 SLC25A36Q96CQ1 311 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 TXNDC15Q96J42 360 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 SLC35G5Q96KT7 338 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 WDFY2Q96P53 400 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 SH3GL3Q99963 347 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 CITED2Q99967 270 aaPredicted RBP6.77□□□□□ -1.33
XRN1-212ENST00000486211 ULBP2Q9BZM5 246 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 OR2J1Q9GZK6 312 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 SIRPDQ9H106 197 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 SEMA6AQ9H2E6 1030 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 OR51I1Q9H343 314 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 CENPHQ9H3R5 247 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 C1orf198Q9H425 327 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 B3GAT2Q9NPZ5 323 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 EXD2Q9NVH0 621 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 KIF17Q9P2E2 1029 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 SNX12Q9UMY4 172 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 PPP1R3CQ9UQK1 317 aa6.77□□□□□ -1.33
XRN1-212ENST00000486211 A0A096LPI6 279 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 BTBD17A6NE02 478 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 ANKRD61A6NGH8 418 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 MS4A18H0YCH9 400 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 AIM2O14862 343 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 OPN1SWP03999 348 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 GKN3PP0CG01 181 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 VSIG10L2P0DP72 767 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 LYL1P12980 280 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 UQCRBP14927 111 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 TNFRSF1AP19438 455 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 ATP5F1P24539 256 aaPredicted RBP6.76□□□□□ -1.33
XRN1-212ENST00000486211 SOAT1P35610 550 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 HPCAL1P37235 193 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 RPS5P46782 204 aaKnown RBP6.76□□□□□ -1.33
XRN1-212ENST00000486211 RPL38P63173 70 aaKnown RBP6.76□□□□□ -1.33
XRN1-212ENST00000486211 MRPS25P82663 173 aaKnown RBP6.76□□□□□ -1.33
XRN1-212ENST00000486211 MS4A18Q3C1V0 323 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 LSM12Q3MHD2 195 aaKnown RBP6.76□□□□□ -1.33
XRN1-212ENST00000486211 ZNF404Q494X3 552 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 XKR7Q5GH72 579 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 ZMAT1Q5H9K5 638 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 MRPL2Q5T653 305 aaKnown RBP6.76□□□□□ -1.33
XRN1-212ENST00000486211 RFPL4BQ6ZWI9 263 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 CALHM3Q86XJ0 350 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 SPERTQ8NA61 448 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 SCCPDHQ8NBX0 429 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 OR8B3Q8NGG8 313 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 OR1J2Q8NGS2 313 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 ITLN1Q8WWA0 313 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 COQ8BQ96D53 544 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 CCDC126Q96EE4 140 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 OR8B2Q96RD0 313 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 GCM1Q9NP62 436 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 TMEM38BQ9NVV0 291 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 TMEM216Q9P0N5 145 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 CLN8Q9UBY8 286 aa6.76□□□□□ -1.33
XRN1-212ENST00000486211 RYR1P21817 5038 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 RNF103-CHMP3A0A140T963 221 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 RBMY1BA6NDE4 496 aaKnown RBP6.75□□□□□ -1.33
XRN1-212ENST00000486211 RBMY1EA6NEQ0 496 aaKnown RBP6.75□□□□□ -1.33
XRN1-212ENST00000486211 SLC28A1O00337 649 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 LSM1O15116 133 aaKnown RBP6.75□□□□□ -1.33
XRN1-212ENST00000486211 NPHS1O60500 1241 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 ZFPL1O95159 310 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 FSTL3O95633 263 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 INHBAP08476 426 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 MMP7P09237 267 aaPredicted RBP6.75□□□□□ -1.33
XRN1-212ENST00000486211 FBP1P09467 338 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 RBMY1DP0C7P1 496 aaKnown RBP6.75□□□□□ -1.33
XRN1-212ENST00000486211 TAC1P20366 129 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 GRPRP30550 384 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 ARRB2P32121 409 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 SLC35A2P78381 396 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 DCTN2Q13561 401 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms