RNA–Protein interactions for RNA: ENST00000484254.1

CNTNAP3B-208, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-208ENST00000484254 BMP4P12644 408 aa19.17■□□□□ 0.66
CNTNAP3B-208ENST00000484254 SDHAP31040 664 aa19.17■□□□□ 0.66
CNTNAP3B-208ENST00000484254 SERPINF1P36955 418 aa19.17■□□□□ 0.66
CNTNAP3B-208ENST00000484254 ADIPOQQ15848 244 aa19.17■□□□□ 0.66
CNTNAP3B-208ENST00000484254 SWI5Q1ZZU3 235 aa19.17■□□□□ 0.66
CNTNAP3B-208ENST00000484254 MST1LQ2TV78 715 aa19.17■□□□□ 0.66
CNTNAP3B-208ENST00000484254 MESTQ5EB52 335 aa19.17■□□□□ 0.66
CNTNAP3B-208ENST00000484254 C1orf94Q6P1W5 598 aa19.17■□□□□ 0.66
CNTNAP3B-208ENST00000484254 PGM2L1Q6PCE3 622 aa19.17■□□□□ 0.66
CNTNAP3B-208ENST00000484254 VHLLQ6RSH7 139 aa19.17■□□□□ 0.66
CNTNAP3B-208ENST00000484254 ZNF584Q8IVC4 421 aa19.17■□□□□ 0.66
CNTNAP3B-208ENST00000484254 LRRC18Q8N456 261 aa19.17■□□□□ 0.66
CNTNAP3B-208ENST00000484254 GNPDA2Q8TDQ7 276 aa19.17■□□□□ 0.66
CNTNAP3B-208ENST00000484254 TRIM15Q9C019 465 aa19.17■□□□□ 0.66
CNTNAP3B-208ENST00000484254 IL20RAQ9UHF4 553 aa19.17■□□□□ 0.66
CNTNAP3B-208ENST00000484254 GDF2Q9UK05 429 aaPredicted RBP19.17■□□□□ 0.66
CNTNAP3B-208ENST00000484254 TEX13CA0A0J9YWL9 993 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 SLC22A23A1A5C7 686 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 PRSS37A4D1T9 235 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 H7C1C5 153 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 H7C417 338 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 NDUFS7O75251 213 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 MMP7P09237 267 aaPredicted RBP19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 OR4A8P0C604 315 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 NR4A1P22736 598 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 THBS4P35443 961 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 GSSP48637 474 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 LCN6P62502 163 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 DAG1Q14118 895 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 SGCAQ16586 387 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 FAM27BQ5VT28 67 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 PGBD2Q6P3X8 592 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 FOXL2NBQ6ZUU3 175 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 LINC00471Q8N535 108 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 OR4C15Q8NGM1 316 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 FANK1Q8TC84 345 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 RASD2Q96D21 266 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 FBXO17Q96EF6 278 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 BDH2Q9BUT1 245 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 KCNN2Q9H2S1 579 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 BARX1Q9HBU1 254 aaPredicted RBP19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 SPEF1Q9Y4P9 236 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 IER3IP1Q9Y5U9 82 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 PMF1-BGLAPU3KQ54 211 aa19.16■□□□□ 0.66
CNTNAP3B-208ENST00000484254 AQP12BA6NM10 295 aa19.15■□□□□ 0.66
CNTNAP3B-208ENST00000484254 VSTM5A8MXK1 200 aa19.15■□□□□ 0.66
CNTNAP3B-208ENST00000484254 TXNDC12O95881 172 aa19.15■□□□□ 0.66
CNTNAP3B-208ENST00000484254 APEHP13798 732 aaKnown RBP19.15■□□□□ 0.66
CNTNAP3B-208ENST00000484254 RPS6KA3P51812 740 aa19.15■□□□□ 0.66
CNTNAP3B-208ENST00000484254 BNIP1Q12981 228 aa19.15■□□□□ 0.66
CNTNAP3B-208ENST00000484254 TSPAN31Q12999 210 aa19.15■□□□□ 0.66
CNTNAP3B-208ENST00000484254 SNTB2Q13425 540 aaKnown RBP19.15■□□□□ 0.66
CNTNAP3B-208ENST00000484254 KRR1Q13601 381 aaKnown RBP19.15■□□□□ 0.66
CNTNAP3B-208ENST00000484254 EFNB3Q15768 340 aa19.15■□□□□ 0.66
CNTNAP3B-208ENST00000484254 RFX4Q33E94 735 aa19.15■□□□□ 0.66
CNTNAP3B-208ENST00000484254 KRT80Q6KB66 452 aa19.15■□□□□ 0.66
CNTNAP3B-208ENST00000484254 AQP12AQ8IXF9 295 aa19.15■□□□□ 0.66
CNTNAP3B-208ENST00000484254 C18orf12Q96KH6 178 aa19.15■□□□□ 0.66
CNTNAP3B-208ENST00000484254 OR52D1Q9H346 318 aa19.15■□□□□ 0.66
CNTNAP3B-208ENST00000484254 C1orf198Q9H425 327 aa19.15■□□□□ 0.66
CNTNAP3B-208ENST00000484254 ACANP16112 2415 aa19.15■□□□□ 0.66
CNTNAP3B-208ENST00000484254 TRIM64A6NGJ6 449 aa19.14■□□□□ 0.65
CNTNAP3B-208ENST00000484254 TRIM64BA6NI03 449 aa19.14■□□□□ 0.65
CNTNAP3B-208ENST00000484254 B9A039 149 aa19.14■□□□□ 0.65
CNTNAP3B-208ENST00000484254 DNAJC8O75937 253 aaPredicted RBP19.14■□□□□ 0.65
CNTNAP3B-208ENST00000484254 PTHP01270 115 aa19.14■□□□□ 0.65
CNTNAP3B-208ENST00000484254 RAP2AP10114 183 aa19.14■□□□□ 0.65
CNTNAP3B-208ENST00000484254 GUCA1AP43080 201 aaPredicted RBP19.14■□□□□ 0.65
CNTNAP3B-208ENST00000484254 SNRPD2P62316 118 aaKnown RBP19.14■□□□□ 0.65
CNTNAP3B-208ENST00000484254 CLEC12BQ2HXU8 276 aa19.14■□□□□ 0.65
CNTNAP3B-208ENST00000484254 OR2T5Q6IEZ7 315 aa19.14■□□□□ 0.65
CNTNAP3B-208ENST00000484254 ADCK1Q86TW2 530 aa19.14■□□□□ 0.65
CNTNAP3B-208ENST00000484254 ADGRG5Q8IZF4 528 aa19.14■□□□□ 0.65
CNTNAP3B-208ENST00000484254 SLC30A7Q8NEW0 376 aa19.14■□□□□ 0.65
CNTNAP3B-208ENST00000484254 OR2T29Q8NH02 315 aa19.14■□□□□ 0.65
CNTNAP3B-208ENST00000484254 CCNB1IP1Q9NPC3 277 aa19.14■□□□□ 0.65
CNTNAP3B-208ENST00000484254 VSX1Q9NZR4 365 aaPredicted RBP19.14■□□□□ 0.65
CNTNAP3B-208ENST00000484254 A0A1W2PPL8 197 aa19.13■□□□□ 0.65
CNTNAP3B-208ENST00000484254 SOCS2O14508 198 aa19.13■□□□□ 0.65
CNTNAP3B-208ENST00000484254 IMPA2O14732 288 aa19.13■□□□□ 0.65
CNTNAP3B-208ENST00000484254 CCNB2O95067 398 aa19.13■□□□□ 0.65
CNTNAP3B-208ENST00000484254 PPP1R3DO95685 299 aa19.13■□□□□ 0.65
CNTNAP3B-208ENST00000484254 CST2P09228 141 aa19.13■□□□□ 0.65
CNTNAP3B-208ENST00000484254 SLC6A6P31641 620 aa19.13■□□□□ 0.65
CNTNAP3B-208ENST00000484254 GALK2Q01415 458 aa19.13■□□□□ 0.65
CNTNAP3B-208ENST00000484254 PLP2Q04941 152 aa19.13■□□□□ 0.65
CNTNAP3B-208ENST00000484254 RAB35Q15286 201 aa19.13■□□□□ 0.65
CNTNAP3B-208ENST00000484254 ZNF770Q6IQ21 691 aaPredicted RBP19.13■□□□□ 0.65
CNTNAP3B-208ENST00000484254 OR9Q2Q8NGE9 314 aa19.13■□□□□ 0.65
CNTNAP3B-208ENST00000484254 ERMAPQ96PL5 475 aaPredicted RBP19.13■□□□□ 0.65
CNTNAP3B-208ENST00000484254 PLK3Q9H4B4 646 aa19.13■□□□□ 0.65
CNTNAP3B-208ENST00000484254 REEP1Q9H902 201 aa19.13■□□□□ 0.65
CNTNAP3B-208ENST00000484254 IQCMA0A1B0GVH7 501 aa19.12■□□□□ 0.65
CNTNAP3B-208ENST00000484254 H7C1Q1 480 aa19.12■□□□□ 0.65
CNTNAP3B-208ENST00000484254 ARPC3O15145 178 aa19.12■□□□□ 0.65
CNTNAP3B-208ENST00000484254 ZNF32P17041 273 aa19.12■□□□□ 0.65
CNTNAP3B-208ENST00000484254 MSR1P21757 451 aa19.12■□□□□ 0.65
CNTNAP3B-208ENST00000484254 LAP3P28838 519 aa19.12■□□□□ 0.65
CNTNAP3B-208ENST00000484254 PABPC1L2AQ5JQF8 200 aa19.12■□□□□ 0.65
CNTNAP3B-208ENST00000484254 ZNF620Q6ZNG0 422 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms