RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 LCE4AQ5TA78 99 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 GKAP1Q5VSY0 366 aaPredicted RBP5.34□□□□□ -1.55
PTCD3-215ENST00000484203 FAM205BPQ63HN1 556 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 ZNF813Q6ZN06 617 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 SLC35D2Q76EJ3 337 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 CALHM3Q86XJ0 350 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 CDK20Q8IZL9 346 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 C10orf111Q8N326 155 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 CIARTQ8N365 385 aaPredicted RBP5.34□□□□□ -1.55
PTCD3-215ENST00000484203 KDM8Q8N371 416 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 DTX3Q8N9I9 347 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 OR2T12Q8NG77 320 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 GPR32P1Q8NGA4 272 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 OR1J2Q8NGS2 313 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 C10orf82Q8WW14 230 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 LIPHQ8WWY8 451 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 TAMM41Q96BW9 452 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 CMTM5Q96DZ9 223 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 THOC1Q96FV9 657 aaKnown RBP5.34□□□□□ -1.55
PTCD3-215ENST00000484203 TNFRSF13CQ96RJ3 184 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 FOXB1Q99853 325 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 SMR3AQ99954 134 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 MS4A5Q9H3V2 200 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 PLK3Q9H4B4 646 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 EFCAB1Q9HAE3 211 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 SMURF2Q9HAU4 748 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 FGFR1OP2Q9NVK5 253 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 GLTPQ9NZD2 209 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 CDC42EP3Q9UKI2 254 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 ZNF346Q9UL40 294 aaKnown RBP5.34□□□□□ -1.55
PTCD3-215ENST00000484203 SLC7A7Q9UM01 511 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 MED31Q9Y3C7 131 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 CMAHPQ9Y471 501 aa5.34□□□□□ -1.55
PTCD3-215ENST00000484203 ZNF469Q96JG9 3925 aaPredicted RBP5.34□□□□□ -1.56
PTCD3-215ENST00000484203 IGHV2OR16-5A0A0B4J2B6 119 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 LOC100653049A0A140TA62 436 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 BLOC1S5-TXNDC5H3BN57 136 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 FBP2O00757 339 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 DHHO43323 396 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 AHCYL1O43865 530 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 TPST2O60704 377 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 KRT34O76011 436 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 OPN1SWP03999 348 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 IFNW1P05000 195 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 SERPINA5P05154 406 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 ASAH2BP0C7U1 165 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 HNF1AP20823 631 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 PCMT1P22061 227 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 NR4A1P22736 598 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 PCSK6P29122 969 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 GLRXP35754 106 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 RAD52P43351 418 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 GZMMP51124 257 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 BIDP55957 195 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 CLRN1P58418 232 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 PCBD1P61457 104 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 RAB1AP62820 205 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 SELENOWP63302 87 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 MRPS11P82912 194 aaKnown RBP5.33□□□□□ -1.56
PTCD3-215ENST00000484203 SLC25A3Q00325 362 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 SPOCK1Q08629 439 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 DBPQ10586 325 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-215ENST00000484203 NPRL3Q12980 569 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 ADIPOQQ15848 244 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 CHRFAM7AQ494W8 412 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 RABL3Q5HYI8 236 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 PRR31Q5SQ13 230 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 CARD17Q5XLA6 110 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 CYB5R2Q6BCY4 276 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 TMEM53Q6P2H8 277 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 PODNL1Q6PEZ8 512 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 HACD2Q6Y1H2 254 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 B3GLCTQ6Y288 498 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 Q71RC1 249 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-215ENST00000484203 LINGO2Q7L985 606 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 RRM2BQ7LG56 351 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 MDP1Q86V88 176 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 COMTD1Q86VU5 262 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 CYP4Z1Q86W10 505 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 CARM1Q86X55 608 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 MICU2Q8IYU8 434 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 RNF113BQ8IZP6 322 aaKnown RBP5.33□□□□□ -1.56
PTCD3-215ENST00000484203 SYT8Q8NBV8 401 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 VANGL1Q8TAA9 524 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-215ENST00000484203 C10orf105Q8TEF2 133 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 TMEM239Q8WW34 195 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 GEMIN6Q8WXD5 167 aaKnown RBP5.33□□□□□ -1.56
PTCD3-215ENST00000484203 TMEM54Q969K7 222 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 FBXO17Q96EF6 278 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 SGTBQ96EQ0 304 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 ZNF583Q96ND8 569 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 MOGAT1Q96PD6 335 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 VRK1Q99986 396 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-215ENST00000484203 WACQ9BTA9 647 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 NSRP1Q9H0G5 558 aaKnown RBP5.33□□□□□ -1.56
PTCD3-215ENST00000484203 ANKRD19PQ9H560 264 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 DYNLRB1Q9NP97 96 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 KRCC1Q9NPI7 259 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-215ENST00000484203 INIPQ9NRY2 104 aa5.33□□□□□ -1.56
PTCD3-215ENST00000484203 MED29Q9NX70 200 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms