RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 ZNF566Q969W8 418 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 DACT3Q96B18 629 aaPredicted RBP9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 SLC47A1Q96FL8 570 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 SIGLEC11Q96RL6 698 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 WFDC6Q9BQY6 131 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 PPCSQ9HAB8 311 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 TPT1P8Q9HAU6 139 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 CACYBPQ9HB71 228 aaKnown RBP9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 BCL2L10Q9HD36 194 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 AIG1Q9NVV5 245 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 ZDHHC8Q9ULC8 765 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 TRIM33Q9UPN9 1127 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 RNF114Q9Y508 228 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 A0A0B4J2E0 115 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 A0A1B0GX12 115 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 WDR91A4D1P6 747 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 CEACAM18A8MTB9 384 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 TPST2O60704 377 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 TGDSO95455 350 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 WNT2P09544 360 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 MYZAPP0CAP1 466 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 STOMP27105 288 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 ETV4P43268 484 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 HSF2Q03933 536 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 HLXQ14774 488 aaPredicted RBP9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 PDCD4Q53EL6 469 aaKnown RBP9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 MBNL2Q5VZF2 373 aaKnown RBP9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 FAM91A1Q658Y4 838 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 RUSC1-AS1Q66K80 236 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 ZNF774Q6NX45 483 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 Q6YL49 198 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 DPPA2Q7Z7J5 298 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 NUDCD3Q8IVD9 361 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 ZNF283Q8N7M2 679 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 OR5J2Q8NH18 312 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 LINC01006Q8NI28 216 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 SLC25A44Q96H78 314 aaPredicted RBP9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 POM121L2Q96KW2 1035 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 ZNF347Q96SE7 839 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 SORT1Q99523 831 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 EPYCQ99645 322 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 CYSLTR2Q9NS75 346 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 TAS2R5Q9NYW4 299 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 ASH2LQ9UBL3 628 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 RAP2CQ9Y3L5 183 aa9.1□□□□□ -0.95
SMARCC1-205ENST00000483847 IGHV2-70DA0A0C4DH43 119 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 C5orf49A4QMS7 147 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 PIN1P1O15428 100 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 MGRN1O60291 552 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 ENTPD5O75356 428 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 CLPXO76031 633 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 MELTFP08582 738 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 ZNF32P17041 273 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 PRKAR1BP31321 381 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 RPL14P50914 215 aaKnown RBP9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 CDH12P55289 794 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 PROK1P58294 105 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 ABCE1P61221 599 aaKnown RBP9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 PPP1CBP62140 327 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 LRRC74AQ0VAA2 488 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 CDK5R2Q13319 367 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 OR1Q1Q15612 314 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 OGFOD2Q6N063 350 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 LRRN1Q6UXK5 716 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 AKR7LQ8NHP1 331 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 BBS10Q8TAM1 723 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 ABHD4Q8TB40 342 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 MCHR2Q969V1 340 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 SSBP3Q9BWW4 388 aaPredicted RBP9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 NANOGQ9H9S0 305 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 MEAF6Q9HAF1 191 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 TCF7L1Q9HCS4 588 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 A4GALTQ9NPC4 353 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 IL20RAQ9UHF4 553 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 LRCH1Q9Y2L9 728 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 TENM3Q9P273 2699 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 COL7A1Q02388 2944 aa9.09□□□□□ -0.95
SMARCC1-205ENST00000483847 TMEM247A6NEH6 219 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 H0YL77 283 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 SDHDO14521 159 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 TYROBPO43914 113 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 ZNF205O95201 554 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 OR6A2O95222 327 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 ANP32DO95626 131 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 MT-ATP6P00846 226 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 SERPINE1P05121 402 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 ZCCHC18P0CG32 403 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 CDAP32320 146 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 LIPAP38571 399 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 MDH2P40926 338 aaKnown RBP9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 PDCD1Q15116 288 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 RGNQ15493 299 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 HIST3H3Q16695 136 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 NRN1LQ496H8 165 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 CEP85LQ5SZL2 805 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 FAM205BPQ63HN1 556 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 BTNL3Q6UXE8 466 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 ZNF620Q6ZNG0 422 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 Q6ZR03 302 aa9.08□□□□□ -0.96
SMARCC1-205ENST00000483847 HIPK4Q8NE63 616 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms