RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, human

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM54-206	ENST00000482771	ZNF84	P51523	738 aa		10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	CLRN1	P58418	232 aa		10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	SLC9A3R2	Q15599	337 aa		10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	ZNF74	Q16587	644 aa		10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	PABPC1L2A	Q5JQF8	200 aa		10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	TMEM255A	Q5JRV8	349 aa		10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	AGBL2	Q5U5Z8	902 aa		10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	LEG1	Q6P5S2	330 aa		10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	HIST3H2A	Q7L7L0	130 aa		10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	RANBP3L	Q86VV4	465 aa	Predicted RBP	10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	GOLGA6L1	Q8N7Z2	621 aa		10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	SYT14	Q8NB59	555 aa		10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	SLC25A40	Q8TBP6	338 aa		10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	HIST1H2AC	Q93077	130 aa		10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	MARS2	Q96GW9	593 aa	Known RBP	10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	OR52B2	Q96RD2	323 aa		10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	ZNF347	Q96SE7	839 aa		10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	ZNF607	Q96SK3	696 aa		10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	MCHR1	Q99705	422 aa		10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	MS4A7	Q9GZW8	240 aa	Predicted RBP	10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	SLITRK2	Q9H156	845 aa		10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	KCNN2	Q9H2S1	579 aa		10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	ZMAT3	Q9HA38	289 aa	Known RBP	10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	NPHS2	Q9NP85	383 aa		10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	NANS	Q9NR45	359 aa		10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	DCAF16	Q9NXF7	216 aa		10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	SLC25A37	Q9NYZ2	338 aa		10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	NPTN	Q9Y639	398 aa		10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	SOX21	Q9Y651	276 aa	Predicted RBP	10.83	□□□□□ -0.68
TMEM54-206	ENST00000482771	ZSCAN5B	A6NJL1	495 aa		10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	SERPINB7	O75635	380 aa		10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	IGHG1	P01857	330 aa		10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	ZNF12	P17014	697 aa		10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	MDK	P21741	143 aa	Predicted RBP	10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	OMG	P23515	440 aa		10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	SLC6A2	P23975	617 aa		10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	AQP1	P29972	269 aa		10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	PCGF2	P35227	344 aa		10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	WNT5A	P41221	380 aa		10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	SCARB2	Q14108	478 aa		10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	NRN1L	Q496H8	165 aa		10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	SWT1	Q5T5J6	900 aa	Known RBP	10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	JAZF1	Q86VZ6	243 aa		10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	ARMC8	Q8IUR7	673 aa		10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	MSRB3	Q8IXL7	192 aa		10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	ZNF101	Q8IZC7	436 aa		10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	ANKRD42	Q8N9B4	389 aa		10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	SMYD1	Q8NB12	490 aa		10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	HIPK4	Q8NE63	616 aa		10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	KLF14	Q8TD94	323 aa	Predicted RBP	10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	IPCEF1	Q8WWN9	437 aa	Predicted RBP	10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	GEMIN6	Q8WXD5	167 aa	Known RBP	10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	MAEL	Q96JY0	434 aa	Known RBP	10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	OR2J1	Q9GZK6	312 aa		10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	SIAE	Q9HAT2	523 aa		10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	KLHL21	Q9UJP4	597 aa		10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	TRIM33	Q9UPN9	1127 aa		10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	INSIG2	Q9Y5U4	225 aa		10.82	□□□□□ -0.68
TMEM54-206	ENST00000482771	LOC100509620	A0A075B734	347 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	IGHV3OR16-10	A0A075B7F0	116 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	C5orf49	A4QMS7	147 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	BLOC1S5-TXNDC5	H3BN57	136 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	CLDN34	H7C241	214 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771		M0R3H8	397 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	SNN	O75324	88 aa	Predicted RBP	10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	GPANK1	O95872	356 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	IGHV2-70	P01814	119 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	IGHM	P01871	453 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	HOXB9	P17482	250 aa	Predicted RBP	10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	CDA	P32320	146 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	LIPA	P38571	399 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	SLC6A9	P48067	706 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	GDI2	P50395	445 aa	Known RBP	10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	WDR4	P57081	412 aa	Known RBP	10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	MAGOH	P61326	146 aa	Known RBP	10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	SEC61A1	P61619	476 aa	Known RBP	10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	SRSF4	Q08170	494 aa	Known RBP	10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	SGCA	Q16586	387 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	HIST3H3	Q16695	136 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	MBNL2	Q5VZF2	373 aa	Known RBP	10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	ZNF613	Q6PF04	617 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	C16orf87	Q6PH81	154 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	TTC33	Q6PID6	262 aa	Predicted RBP	10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	MAVS	Q7Z434	540 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	KLHL36	Q8N4N3	616 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	AKR7L	Q8NHP1	331 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	TMIGD2	Q96BF3	282 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	POM121L2	Q96KW2	1035 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	MRI1	Q9BV20	369 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	MRPL13	Q9BYD1	178 aa	Known RBP	10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	PATZ1	Q9HBE1	687 aa	Known RBP	10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	MSL2	Q9HCI7	577 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	CCNB1IP1	Q9NPC3	277 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	CYSLTR2	Q9NS75	346 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	ZDHHC8	Q9ULC8	765 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	CMYA5	Q8N3K9	4069 aa		10.81	□□□□□ -0.68
TMEM54-206	ENST00000482771	CPSF4L	A6NMK7	179 aa	Known RBP	10.8	□□□□□ -0.68
TMEM54-206	ENST00000482771	KPNA4	O00629	521 aa	Predicted RBP	10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms