RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 LDB3O75112 727 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 BANF1O75531 89 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 WISP2O76076 250 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 MYO1DO94832 1006 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 NXPH3O95157 252 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 TFPIP10646 304 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 CHRNB4P30926 498 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 CDKN2DP55273 166 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 RAB38P57729 211 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 BTG2P78543 158 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 TRAP1Q12931 704 aaKnown RBP5.73□□□□□ -1.49
CLK1-212ENST00000482590 MAD2L1Q13257 205 aaPredicted RBP5.73□□□□□ -1.49
CLK1-212ENST00000482590 CYLC2Q14093 348 aaPredicted RBP5.73□□□□□ -1.49
CLK1-212ENST00000482590 VEZF1Q14119 521 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 BCL2A1Q16548 175 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 KLHL22Q53GT1 634 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 BEX5Q5H9J7 111 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 LIPKQ5VXJ0 399 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 TRIM40Q6P9F5 258 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 SLC29A4Q7RTT9 530 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 SERPINA11Q86U17 422 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 THOC6Q86W42 341 aaKnown RBP5.73□□□□□ -1.49
CLK1-212ENST00000482590 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.73□□□□□ -1.49
CLK1-212ENST00000482590 TTLQ8NG68 377 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 OR4K1Q8NGD4 311 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 SSMEM1Q8WWF3 244 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 RND1Q92730 232 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 TNFRSF14Q92956 283 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 OTULINQ96BN8 352 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 DUX5Q96PT3 197 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 OR4K3Q96R72 315 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 CCT8L2Q96SF2 557 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 HDHD2Q9H0R4 259 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 PPP1R3EQ9H7J1 279 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 TRIM45Q9H8W5 580 aaPredicted RBP5.73□□□□□ -1.49
CLK1-212ENST00000482590 ADAP2Q9NPF8 381 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 PRTFDC1Q9NRG1 225 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 GSN-AS1Q9NRJ2 163 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 PNO1Q9NRX1 252 aaKnown RBP5.73□□□□□ -1.49
CLK1-212ENST00000482590 CISD1Q9NZ45 108 aaKnown RBP5.73□□□□□ -1.49
CLK1-212ENST00000482590 AHSPQ9NZD4 102 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 PIPOXQ9P0Z9 390 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 ZNF639Q9UID6 485 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 RNF6Q9Y252 685 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 PPP2R2CQ9Y2T4 447 aa5.73□□□□□ -1.49
CLK1-212ENST00000482590 PRRC2AP48634 2157 aaKnown RBP5.72□□□□□ -1.49
CLK1-212ENST00000482590 HRNRQ86YZ3 2850 aaPredicted RBP5.72□□□□□ -1.49
CLK1-212ENST00000482590 IGKV3D-11A0A0A0MRZ8 115 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 A0A0G2JN53 185 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 NKX2-6A6NCS4 301 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 FAM166BA8MTA8 275 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 C4orf51C9J302 202 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 NPIPA3F8WFD2 350 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 H0YIZ8 118 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 PDLIM1O00151 329 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 ADAM10O14672 748 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 ERI3O43414 337 aaKnown RBP5.72□□□□□ -1.49
CLK1-212ENST00000482590 TIMM8AO60220 97 aaPredicted RBP5.72□□□□□ -1.49
CLK1-212ENST00000482590 CLN5O75503 358 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 RGS11O94810 467 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 IFNA16P05015 189 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 SERPINA6P08185 405 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 CCL2P13500 99 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 GP9P14770 177 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 CD1EP15812 388 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 NT5EP21589 574 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 DCTDP32321 178 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 CD80P33681 288 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 SOX2P48431 317 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 ATP12AP54707 1039 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 BTN3A2P78410 334 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 MYBPHQ13203 477 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 TGFBIQ15582 683 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 PPP1R3AQ16821 1122 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 ZSWIM7Q19AV6 140 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 SYT14P1Q58G82 188 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 LCN1P1Q5VSP4 162 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 HIST2H2AA3Q6FI13 130 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 SBSNQ6UWP8 590 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 SSX9Q7RTT3 188 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 CCDC25Q86WR0 208 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 CHERPQ8IWX8 916 aaKnown RBP5.72□□□□□ -1.49
CLK1-212ENST00000482590 GPALPP1Q8IXQ4 340 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 PDIK1LQ8N165 341 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 GCSAMQ8N6F7 178 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 ZFP62Q8NB50 900 aaPredicted RBP5.72□□□□□ -1.49
CLK1-212ENST00000482590 SYT14Q8NB59 555 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 APCDD1LQ8NCL9 501 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 FAM83FQ8NEG4 500 aaPredicted RBP5.72□□□□□ -1.49
CLK1-212ENST00000482590 NFAM1Q8NET5 270 aaPredicted RBP5.72□□□□□ -1.49
CLK1-212ENST00000482590 C16orf52Q8NHV5 167 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 TMEM45BQ96B21 275 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 MS4A14Q96JA4 679 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 VSTM2LQ96N03 204 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 SLC29A1Q99808 456 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 THAP7Q9BT49 309 aaPredicted RBP5.72□□□□□ -1.49
CLK1-212ENST00000482590 PRSS22Q9GZN4 317 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 KCNN2Q9H2S1 579 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 KCNJ16Q9NPI9 418 aa5.72□□□□□ -1.49
CLK1-212ENST00000482590 DDX28Q9NUL7 540 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms