RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 ADAM19Q9H013 955 aa13.42□□□□□ -0.26
ATG4B-220ENST00000482507 EXOSC3Q9NQT5 275 aaKnown RBP13.42□□□□□ -0.26
ATG4B-220ENST00000482507 LANCL2Q9NS86 450 aa13.42□□□□□ -0.26
ATG4B-220ENST00000482507 COQ3Q9NZJ6 369 aa13.42□□□□□ -0.26
ATG4B-220ENST00000482507 MTFP1Q9UDX5 166 aa13.42□□□□□ -0.26
ATG4B-220ENST00000482507 MAB21L2Q9Y586 359 aa13.42□□□□□ -0.26
ATG4B-220ENST00000482507 CACNA1CQ13936 2221 aa13.42□□□□□ -0.26
ATG4B-220ENST00000482507 IGHV5-51A0A0C4DH38 117 aa13.42□□□□□ -0.26
ATG4B-220ENST00000482507 C11orf98E9PRG8 122 aa13.42□□□□□ -0.26
ATG4B-220ENST00000482507 CTAG2O75638 210 aa13.42□□□□□ -0.26
ATG4B-220ENST00000482507 ITGA5P08648 1049 aa13.42□□□□□ -0.26
ATG4B-220ENST00000482507 H2BFSP57053 126 aa13.42□□□□□ -0.26
ATG4B-220ENST00000482507 NKAIN2Q5VXU1 208 aa13.42□□□□□ -0.26
ATG4B-220ENST00000482507 LRRN1Q6UXK5 716 aa13.42□□□□□ -0.26
ATG4B-220ENST00000482507 ZNF563Q8TA94 476 aa13.42□□□□□ -0.26
ATG4B-220ENST00000482507 GPR148Q8TDV2 347 aa13.42□□□□□ -0.26
ATG4B-220ENST00000482507 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.42□□□□□ -0.26
ATG4B-220ENST00000482507 INTS14Q96SY0 518 aa13.42□□□□□ -0.26
ATG4B-220ENST00000482507 OR8D2Q9GZM6 311 aa13.42□□□□□ -0.26
ATG4B-220ENST00000482507 KCNN3Q9UGI6 736 aa13.42□□□□□ -0.26
ATG4B-220ENST00000482507 FBXO4Q9UKT5 387 aa13.42□□□□□ -0.26
ATG4B-220ENST00000482507 SLC22A13Q9Y226 551 aa13.42□□□□□ -0.26
ATG4B-220ENST00000482507 R4GN57 208 aa13.42□□□□□ -0.26
ATG4B-220ENST00000482507 CUL9Q8IWT3 2517 aa13.42□□□□□ -0.26
ATG4B-220ENST00000482507 BLACEA4D250 179 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 CDC14CA4D256 554 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 GGT3PA6NGU5 568 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 TMEM212A6NML5 194 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 WNT11O96014 354 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 BGLAPP02818 100 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 M6PRP20645 277 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 CAPZBP47756 277 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 MFSD13AQ14CX5 517 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 EMC4Q5J8M3 183 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 NHLRC3Q5JS37 347 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.41□□□□□ -0.26
ATG4B-220ENST00000482507 ANKRD16Q6P6B7 361 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.41□□□□□ -0.26
ATG4B-220ENST00000482507 ZNF417Q8TAU3 575 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 FAM174AQ8TBP5 190 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 CEP192Q8TEP8 1941 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 SNRPGP15A8MWD9 76 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 MCRIP1C9JLW8 97 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 PNPP00491 289 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 PLGP00747 810 aaPredicted RBP13.41□□□□□ -0.26
ATG4B-220ENST00000482507 PPICP45877 212 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 SKP1P63208 163 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 EGR3Q06889 387 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 ZNF227Q86WZ6 799 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 SLC25A45Q8N413 288 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 DCBLD2Q96PD2 775 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 COMMD4Q9H0A8 199 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 ELOVL3Q9HB03 270 aa13.41□□□□□ -0.26
ATG4B-220ENST00000482507 RBBP9O75884 186 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 RENP00797 406 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 PROS1P07225 676 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 OR1D4P47884 311 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 POU3F4P49335 361 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 RAP2BP61225 183 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 ELOCQ15369 112 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 MEP1BQ16820 701 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 HYAL4Q2M3T9 481 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 SDR16C5Q8N3Y7 309 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 OTOSQ8NHW6 89 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 ADAMTS18Q8TE60 1221 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 ADIPOR1Q96A54 375 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 GINS4Q9BRT9 223 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 TEX51A0A1B0GUA7 166 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 L7N2F9 121 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 SUSD5O60279 629 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 PIAS2O75928 621 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 NFYAP23511 347 aaPredicted RBP13.4□□□□□ -0.26
ATG4B-220ENST00000482507 HNRNPKP61978 463 aaKnown RBP eCLIP13.4□□□□□ -0.267e-7■■■■□ 23
ATG4B-220ENST00000482507 SHBQ15464 509 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 ETFDHQ16134 617 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 DCAF12L2Q5VW00 463 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 OR7E24Q6IFN5 339 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 MDGA2Q7Z553 956 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 MARCH3Q86UD3 253 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 ZBTB44Q8NCP5 570 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 DVL3Q92997 716 aaPredicted RBP13.4□□□□□ -0.26
ATG4B-220ENST00000482507 TGM7Q96PF1 710 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 GAL3ST4Q96RP7 486 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 CHST6Q9GZX3 395 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 GPN1Q9HCN4 374 aaPredicted RBP13.4□□□□□ -0.26
ATG4B-220ENST00000482507 MRPL22Q9NWU5 206 aaKnown RBP13.4□□□□□ -0.26
ATG4B-220ENST00000482507 ZNF224Q9NZL3 707 aa13.4□□□□□ -0.26
ATG4B-220ENST00000482507 CACNA1EQ15878 2313 aa13.4□□□□□ -0.27
ATG4B-220ENST00000482507 PI4KAP42356 2102 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 PCDH15Q96QU1 1955 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 TRAV18A0A075B6X5 111 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 B8ZZF3 427 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 HCRTR2O43614 444 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 DDAH2O95865 285 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 HIST1H2ABP04908 130 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 CCKBRP32239 447 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 GALNSP34059 522 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 MFGE8Q08431 387 aaPredicted RBP13.39□□□□□ -0.27
ATG4B-220ENST00000482507 SERTAD2Q14140 314 aa13.39□□□□□ -0.27
ATG4B-220ENST00000482507 C2orf76Q3KRA6 126 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms