RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ZYG11BQ9C0D3 744 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 ELOVL4Q9GZR5 314 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 SLC25A19Q9HC21 320 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 TMBIM4Q9HC24 238 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 SLC2A9Q9NRM0 540 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 GIN1Q9NXP7 522 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 VNN3Q9NY84 501 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 CCDC59Q9P031 241 aaKnown RBP3.54□□□□□ -1.84
VPS41-212ENST00000482217 ZNF319Q9P2F9 582 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 PURGQ9UJV8 347 aaKnown RBP3.54□□□□□ -1.84
VPS41-212ENST00000482217 TMCO1Q9UM00 188 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 SNX24Q9Y343 169 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 INSL5Q9Y5Q6 135 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 CAMSAP1Q5T5Y3 1602 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 FLT4P35916 1363 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 MROH7Q68CQ1 1323 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 USP42Q9H9J4 1324 aaKnown RBP3.53□□□□□ -1.84
VPS41-212ENST00000482217 TRAV8-7A0A075B6U6 113 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 A0A1B0GV72 72 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 FAM231BA6NCW3 169 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 A6NIZ1 184 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 FTCDNL1E5RQL4 147 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 TMEM178BH3BS89 294 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 TMX2-CTNND1H3BSU7 103 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 PSMD12O00232 456 aaPredicted RBP3.53□□□□□ -1.84
VPS41-212ENST00000482217 DFFAO00273 331 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 PLPP3O14495 311 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 GAPDHSO14556 408 aaPredicted RBP3.53□□□□□ -1.84
VPS41-212ENST00000482217 UBDO15205 165 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 P2RX6O15547 441 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 GPR137BO60478 399 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 AQP8O94778 261 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 ATP6V1G2O95670 118 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 BMP15O95972 392 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 GLUD1P00367 558 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 IFNA21P01568 189 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 WNT2P09544 360 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 ZDHHC11BP0C7U3 371 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 LINC00614P0C842 121 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 ABOP16442 354 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 CBLP22681 906 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 CA4P22748 312 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 PMELP40967 661 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 MAGEA12P43365 314 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 ACOT2P49753 483 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 IDH3GP51553 393 aaPredicted RBP3.53□□□□□ -1.84
VPS41-212ENST00000482217 CAV2P51636 162 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 PRKXP51817 358 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 OR2B8PP59922 312 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 BTG1P62324 171 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 PITX1P78337 314 aaPredicted RBP3.53□□□□□ -1.84
VPS41-212ENST00000482217 DLG1Q12959 904 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 ASAH1Q13510 395 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 EIF4EBP2Q13542 120 aaPredicted RBP3.53□□□□□ -1.84
VPS41-212ENST00000482217 SLC1A5Q15758 541 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 PDZD11Q5EBL8 140 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 OR10J3Q5JRS4 329 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 SLC35D3Q5M8T2 416 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 PAPPA-AS1Q5QFB9 102 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 TPRG1LQ5T0D9 272 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 TRIQKQ629K1 86 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 WDR25Q64LD2 544 aaPredicted RBP3.53□□□□□ -1.84
VPS41-212ENST00000482217 TYW3Q6IPR3 259 aaKnown RBP3.53□□□□□ -1.84
VPS41-212ENST00000482217 ZNF544Q6NX49 715 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 STEAP1BQ6NZ63 245 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 BTNL3Q6UXE8 466 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 C4orf22Q6V702 233 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 Q6ZSR9 355 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 Q6ZT83 130 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 SSX6Q7RTT6 188 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 APTXQ7Z2E3 356 aaKnown RBP3.53□□□□□ -1.84
VPS41-212ENST00000482217 FAM19A1Q7Z5A9 133 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 TMEM144Q7Z5S9 345 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 GLCCI1Q86VQ1 547 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 LACC1Q8IV20 430 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 RIMKLAQ8IXN7 391 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 DND1Q8IYX4 353 aaKnown RBP3.53□□□□□ -1.84
VPS41-212ENST00000482217 KIRREL3Q8IZU9 778 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 OR6V1Q8N148 313 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 OR2L13Q8N349 312 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 PRSS35Q8N3Z0 413 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 LRRC18Q8N456 261 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 CPSF7Q8N684 471 aaKnown RBP3.53□□□□□ -1.84
VPS41-212ENST00000482217 TPRX1Q8N7U7 411 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 Q8N9P0 234 aaPredicted RBP3.53□□□□□ -1.84
VPS41-212ENST00000482217 ATP6V1C2Q8NEY4 427 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 VN1R2Q8NFZ6 395 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 OR52H1Q8NGJ2 320 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 OR1S2Q8NGQ3 325 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 OR6K2Q8NGY2 324 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 OR6K3Q8NGY3 331 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 OR51F2Q8NH61 342 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 OR5AK3PQ8NH89 298 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 OR14A16Q8NHC5 309 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 ITFG1Q8TB96 612 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 SFXN5Q8TD22 340 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 ACER1Q8TDN7 264 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 DYRK2Q92630 601 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 TLCD1Q96CP7 247 aa3.53□□□□□ -1.84
VPS41-212ENST00000482217 NXPE2Q96DL1 559 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms