RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 MED29Q9NX70 200 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 AK6Q9Y3D8 172 aaKnown RBP12.98□□□□□ -0.33
CHD3-211ENST00000481999 GLCEO94923 617 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 MPZL1O95297 269 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 CD59P13987 128 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 LCN1P31025 176 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 HTR2BP41595 481 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 RAG2P55895 527 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 SNRPD2P62316 118 aaKnown RBP12.98□□□□□ -0.33
CHD3-211ENST00000481999 FMODQ06828 376 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 UBE2NLQ5JXB2 153 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 CD276Q5ZPR3 534 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 SLC22A10Q63ZE4 541 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 SLC35D2Q76EJ3 337 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 OR5L2Q8NGL0 311 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 OR6N2Q8NGY6 317 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 SPACA9Q96E40 222 aaPredicted RBP12.98□□□□□ -0.33
CHD3-211ENST00000481999 OR51J1Q9H342 316 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 C19orf25Q9UFG5 118 aaPredicted RBP12.98□□□□□ -0.33
CHD3-211ENST00000481999 CHCHD2Q9Y6H1 151 aaPredicted RBP12.98□□□□□ -0.33
CHD3-211ENST00000481999 DOCK10Q96BY6 2186 aa12.98□□□□□ -0.33
CHD3-211ENST00000481999 A0A1W2PNR3 127 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 ANKUB1A6NFN9 424 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 PDCD5O14737 125 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 FABP7O15540 132 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 DKK1O94907 266 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 WNT11O96014 354 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 GIFP27352 417 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 OTX2P32243 289 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 INSM1Q01101 510 aaPredicted RBP12.97□□□□□ -0.33
CHD3-211ENST00000481999 DYRK1AQ13627 763 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 DBX2Q6ZNG2 339 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 MAMDC2Q7Z304 686 aaPredicted RBP12.97□□□□□ -0.33
CHD3-211ENST00000481999 C9orf62Q8N4C0 152 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 WDSUB1Q8N9V3 476 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 LGALS14Q8TCE9 139 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 SMIM4Q8WVI0 70 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 SNAPC3Q92966 411 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 RNF166Q96A37 237 aaPredicted RBP12.97□□□□□ -0.33
CHD3-211ENST00000481999 IMMP1LQ96LU5 166 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 PRRX2Q99811 253 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 EMC6Q9BV81 110 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 WDR54Q9H977 334 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 WIF1Q9Y5W5 379 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 PHF3Q92576 2039 aaKnown RBP12.97□□□□□ -0.33
CHD3-211ENST00000481999 ZFHX2Q9C0A1 2572 aaPredicted RBP12.97□□□□□ -0.33
CHD3-211ENST00000481999 C9J4A7 227 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 FTCDNL1E5RQL4 147 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 TMEM127O75204 238 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 CCL3P10147 92 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 CTLA4P16410 223 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 SRMP19623 302 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 TCN2P20062 427 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 SGCBQ16585 318 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 RNASE12Q5GAN4 147 aaKnown RBP12.97□□□□□ -0.33
CHD3-211ENST00000481999 B3GNTL1Q67FW5 361 aaPredicted RBP12.97□□□□□ -0.33
CHD3-211ENST00000481999 MDGA2Q7Z553 956 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 OR2Y1Q8NGV0 311 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 POC1BQ8TC44 478 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 OIT3Q8WWZ8 545 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 ACTR6Q9GZN1 396 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 RANBP3Q9H6Z4 567 aaPredicted RBP12.97□□□□□ -0.33
CHD3-211ENST00000481999 NOX4Q9NPH5 578 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 ZNF275Q9NSD4 429 aaPredicted RBP12.97□□□□□ -0.33
CHD3-211ENST00000481999 FAM86C1Q9NVL1 165 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 PTTG3PQ9NZH4 202 aa12.97□□□□□ -0.33
CHD3-211ENST00000481999 PCDHGA9Q9Y5G4 932 aaKnown RBP12.97□□□□□ -0.33
CHD3-211ENST00000481999 IGKV1D-43A0A0B4J1Z2 117 aa12.96□□□□□ -0.33
CHD3-211ENST00000481999 TRABD2BA6NFA1 517 aa12.96□□□□□ -0.33
CHD3-211ENST00000481999 ERVH48-1M5A8F1 160 aa12.96□□□□□ -0.33
CHD3-211ENST00000481999 PLPP3O14495 311 aa12.96□□□□□ -0.33
CHD3-211ENST00000481999 AHSA1O95433 338 aa12.96□□□□□ -0.33
CHD3-211ENST00000481999 IGF2P01344 180 aa12.96□□□□□ -0.33
CHD3-211ENST00000481999 HLA-DQA2P01906 255 aa12.96□□□□□ -0.33
CHD3-211ENST00000481999 FBXO45P0C2W1 286 aa12.96□□□□□ -0.33
CHD3-211ENST00000481999 ANXA3P12429 323 aa12.96□□□□□ -0.33
CHD3-211ENST00000481999 SFTPDP35247 375 aa12.96□□□□□ -0.33
CHD3-211ENST00000481999 SNTB2Q13425 540 aaKnown RBP12.96□□□□□ -0.33
CHD3-211ENST00000481999 TRA2AQ13595 282 aaKnown RBP eCLIP12.96□□□□□ -0.33
CHD3-211ENST00000481999 PLA2G2CQ5R387 149 aa12.96□□□□□ -0.33
CHD3-211ENST00000481999 ESPNLQ6ZVH7 1005 aa12.96□□□□□ -0.33
CHD3-211ENST00000481999 RAB11FIP2Q7L804 512 aa12.96□□□□□ -0.33
CHD3-211ENST00000481999 TIGD4Q8IY51 512 aa12.96□□□□□ -0.33
CHD3-211ENST00000481999 RPS4Y2Q8TD47 263 aa12.96□□□□□ -0.33
CHD3-211ENST00000481999 GNRHR2Q96P88 292 aa12.96□□□□□ -0.33
CHD3-211ENST00000481999 CDCP1Q9H5V8 836 aa12.96□□□□□ -0.33
CHD3-211ENST00000481999 C12orf10Q9HB07 376 aa12.96□□□□□ -0.33
CHD3-211ENST00000481999 FOXJ2Q9P0K8 574 aa12.96□□□□□ -0.33
CHD3-211ENST00000481999 KCNG2Q9UJ96 466 aa12.96□□□□□ -0.33
CHD3-211ENST00000481999 ZNF281Q9Y2X9 895 aa12.96□□□□□ -0.33
CHD3-211ENST00000481999 LOC102723996A0A087X1L8 192 aa12.96□□□□□ -0.34
CHD3-211ENST00000481999 ZNF814B7Z6K7 855 aa12.96□□□□□ -0.34
CHD3-211ENST00000481999 SLC16A7O60669 478 aa12.96□□□□□ -0.34
CHD3-211ENST00000481999 KLF9Q13886 244 aaPredicted RBP12.96□□□□□ -0.34
CHD3-211ENST00000481999 PLPPR5Q32ZL2 321 aa12.96□□□□□ -0.34
CHD3-211ENST00000481999 ZNF782Q6ZMW2 699 aaPredicted RBP12.96□□□□□ -0.34
CHD3-211ENST00000481999 BTN2A1Q7KYR7 527 aa12.96□□□□□ -0.34
CHD3-211ENST00000481999 CDH24Q86UP0 819 aa12.96□□□□□ -0.34
CHD3-211ENST00000481999 OR11H7Q8NGC8 314 aa12.96□□□□□ -0.34
CHD3-211ENST00000481999 OR8K3Q8NH51 312 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms