RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 DEPDC4Q8N2C3 294 aa9.85□□□□□ -0.83
RAPGEF1-207ENST00000481260 SVOPLQ8N434 492 aa9.85□□□□□ -0.83
RAPGEF1-207ENST00000481260 ZNF525Q8N782 197 aa9.85□□□□□ -0.83
RAPGEF1-207ENST00000481260 FAM169BQ8N8A8 192 aa9.85□□□□□ -0.83
RAPGEF1-207ENST00000481260 CPEB3Q8NE35 698 aaKnown RBP9.85□□□□□ -0.83
RAPGEF1-207ENST00000481260 NSMCE2Q96MF7 247 aa9.85□□□□□ -0.83
RAPGEF1-207ENST00000481260 SORCS2Q96PQ0 1159 aa9.85□□□□□ -0.83
RAPGEF1-207ENST00000481260 NR1H4Q96RI1 486 aaPredicted RBP9.85□□□□□ -0.83
RAPGEF1-207ENST00000481260 MYEF2Q9P2K5 600 aaKnown RBP9.85□□□□□ -0.83
RAPGEF1-207ENST00000481260 NKX1-2Q9UD57 310 aaPredicted RBP9.85□□□□□ -0.83
RAPGEF1-207ENST00000481260 MAGEL2Q9UJ55 1249 aa9.85□□□□□ -0.83
RAPGEF1-207ENST00000481260 SAMD4AQ9UPU9 718 aaKnown RBP9.85□□□□□ -0.83
RAPGEF1-207ENST00000481260 DNHD1Q96M86 4753 aa9.85□□□□□ -0.83
RAPGEF1-207ENST00000481260 CUBNO60494 3623 aa9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 SONP18583 2426 aaKnown RBP9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 ABCA2Q9BZC7 2435 aa9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 A0A096LNT2 108 aa9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 SH3PXD2BA1X283 911 aa9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 DPPA5A6NC42 116 aa9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 MPZL1O95297 269 aa9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 MMP7P09237 267 aaPredicted RBP9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 HOXB4P17483 251 aaPredicted RBP9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 RRM2P31350 389 aa9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 ARR3P36575 388 aa9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 SERPINF1P36955 418 aa9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 ERVS71-1P61550 626 aa9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 HNRNPA0Q13151 305 aaKnown RBP9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 KPNB1Q14974 876 aaKnown RBP9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 C3orf36Q3SXR2 165 aa9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 ZBED5Q49AG3 693 aa9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 TMEM255AQ5JRV8 349 aa9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 C10orf128Q5T292 105 aa9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 PTCHD4Q6ZW05 846 aa9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 FAM122BQ7Z309 247 aa9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 PIWIL3Q7Z3Z3 882 aaKnown RBP9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 CYP4Z1Q86W10 505 aa9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 RNF113BQ8IZP6 322 aaKnown RBP9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 AKR7LQ8NHP1 331 aa9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 GTF3AQ92664 365 aaKnown RBP9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 CCDC124Q96CT7 223 aaKnown RBP9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 YIPF3Q9GZM5 350 aa9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 DENND2DQ9H6A0 471 aaPredicted RBP9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 EMC7Q9NPA0 242 aa9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 PAPOLBQ9NRJ5 636 aaKnown RBP9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 FAIMQ9NVQ4 179 aa9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 TAS2R1Q9NYW7 299 aa9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 STX18Q9P2W9 335 aaKnown RBP9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 SCOCQ9UIL1 159 aa9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 SIGLEC7Q9Y286 467 aa9.84□□□□□ -0.83
RAPGEF1-207ENST00000481260 TEX13CA0A0J9YWL9 993 aa9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 MAGEA13PA6NCF6 341 aa9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 FAM157BP0CG42 384 aa9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 OR8G3PP0DMU2 310 aa9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 FOSL1P15407 271 aa9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 NR4A1P22736 598 aa9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 APEX1P27695 318 aaKnown RBP9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 LAP3P28838 519 aa9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 RPL4P36578 427 aaKnown RBP9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 ERFP50548 548 aa9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 SLC34A1Q06495 639 aa9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 DAG1Q14118 895 aa9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 MAD2L1BPQ15013 274 aaPredicted RBP9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 SGCAQ16586 387 aa9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 CLEC9AQ6UXN8 241 aa9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 ZDHHC21Q8IVQ6 265 aa9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 ARIH2OSQ8N7S6 290 aa9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 NUP37Q8NFH4 326 aa9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 OR9Q2Q8NGE9 314 aa9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 TRMT61AQ96FX7 289 aaKnown RBP9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 DOK1Q99704 481 aa9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 KCNS3Q9BQ31 491 aa9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 SYT3Q9BQG1 590 aa9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 BTBD10Q9BSF8 475 aa9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 MRPL37Q9BZE1 423 aaKnown RBP9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 GRIP2Q9C0E4 1043 aa9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 ANKRD19PQ9H560 264 aa9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 FAM32AQ9Y421 112 aaKnown RBP9.83□□□□□ -0.84
RAPGEF1-207ENST00000481260 CR1P17927 2039 aa9.82□□□□□ -0.84
RAPGEF1-207ENST00000481260 LOC100509620A0A075B734 347 aa9.82□□□□□ -0.84
RAPGEF1-207ENST00000481260 A0A1W2PPL8 197 aa9.82□□□□□ -0.84
RAPGEF1-207ENST00000481260 SLC22A23A1A5C7 686 aa9.82□□□□□ -0.84
RAPGEF1-207ENST00000481260 UNC119BA6NIH7 251 aa9.82□□□□□ -0.84
RAPGEF1-207ENST00000481260 NPIPB13A6NJU9 1138 aa9.82□□□□□ -0.84
RAPGEF1-207ENST00000481260 NPIPB4C9JG80 1138 aa9.82□□□□□ -0.84
RAPGEF1-207ENST00000481260 LYNX1G3V0Z9 82 aa9.82□□□□□ -0.84
RAPGEF1-207ENST00000481260 H7C417 338 aa9.82□□□□□ -0.84
RAPGEF1-207ENST00000481260 DCTN6O00399 190 aa9.82□□□□□ -0.84
RAPGEF1-207ENST00000481260 SOCS2O14508 198 aa9.82□□□□□ -0.84
RAPGEF1-207ENST00000481260 GMNNO75496 209 aa9.82□□□□□ -0.84
RAPGEF1-207ENST00000481260 UBL3O95164 117 aa9.82□□□□□ -0.84
RAPGEF1-207ENST00000481260 GADD45GO95257 159 aa9.82□□□□□ -0.84
RAPGEF1-207ENST00000481260 PPP1R3DO95685 299 aa9.82□□□□□ -0.84
RAPGEF1-207ENST00000481260 RAB36O95755 333 aa9.82□□□□□ -0.84
RAPGEF1-207ENST00000481260 SERPINA5P05154 406 aa9.82□□□□□ -0.84
RAPGEF1-207ENST00000481260 FABP3P05413 133 aa9.82□□□□□ -0.84
RAPGEF1-207ENST00000481260 CD14P08571 375 aa9.82□□□□□ -0.84
RAPGEF1-207ENST00000481260 LYNX1P0DP58 116 aa9.82□□□□□ -0.84
RAPGEF1-207ENST00000481260 CTLA4P16410 223 aa9.82□□□□□ -0.84
RAPGEF1-207ENST00000481260 ZNF32P17041 273 aa9.82□□□□□ -0.84
RAPGEF1-207ENST00000481260 IFNA8P32881 189 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms