RNA–Protein interactions for RNA: ENST00000480793.1

R3HDM1-214, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 235 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-214ENST00000480793 SPANXA2-OT1Q8N9U9 137 aa0.58□□□□□ -2.32
R3HDM1-214ENST00000480793 RTN4IP1Q8WWV3 396 aaPredicted RBP0.58□□□□□ -2.32
R3HDM1-214ENST00000480793 CREB3L1Q96BA8 519 aa0.58□□□□□ -2.32
R3HDM1-214ENST00000480793 CXorf40BQ96DE9 158 aa0.58□□□□□ -2.32
R3HDM1-214ENST00000480793 TVP23CQ96ET8 276 aa0.58□□□□□ -2.32
R3HDM1-214ENST00000480793 C12orf42Q96LP6 360 aa0.58□□□□□ -2.32
R3HDM1-214ENST00000480793 PSKH2Q96QS6 385 aa0.58□□□□□ -2.32
R3HDM1-214ENST00000480793 PANX2Q96RD6 677 aa0.58□□□□□ -2.32
R3HDM1-214ENST00000480793 ZNF382Q96SR6 550 aa0.58□□□□□ -2.32
R3HDM1-214ENST00000480793 SORT1Q99523 831 aa0.58□□□□□ -2.32
R3HDM1-214ENST00000480793 THUMPD2Q9BTF0 503 aaKnown RBP0.58□□□□□ -2.32
R3HDM1-214ENST00000480793 OR52D1Q9H346 318 aa0.58□□□□□ -2.32
R3HDM1-214ENST00000480793 LIN28AQ9H9Z2 209 aaKnown RBP0.58□□□□□ -2.32
R3HDM1-214ENST00000480793 PALMDQ9NP74 551 aa0.58□□□□□ -2.32
R3HDM1-214ENST00000480793 FBXO6Q9NRD1 293 aaPredicted RBP0.58□□□□□ -2.32
R3HDM1-214ENST00000480793 RNF14Q9UBS8 474 aa0.58□□□□□ -2.32
R3HDM1-214ENST00000480793 CTNNA3Q9UI47 895 aa0.58□□□□□ -2.32
R3HDM1-214ENST00000480793 TMCO1Q9UM00 188 aa0.58□□□□□ -2.32
R3HDM1-214ENST00000480793 MMACHCQ9Y4U1 282 aa0.58□□□□□ -2.32
R3HDM1-214ENST00000480793 UBIAD1Q9Y5Z9 338 aa0.58□□□□□ -2.32
R3HDM1-214ENST00000480793 BAZ2AQ9UIF9 1905 aaKnown RBP0.58□□□□□ -2.32
R3HDM1-214ENST00000480793 A0A1W2PPE3 182 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 CCDC182A6NF36 153 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 CCL21O00585 134 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 TOM1O60784 492 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 TBX19O60806 448 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 SMPD2O60906 423 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 HLA-DQA1P01909 254 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 HLA-DPB1P04440 258 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 ZNF735P0CB33 412 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 C1GALT1C1LP0DN25 315 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 KRT13P13646 458 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 SERPINB5P36952 375 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 CEACAM6P40199 344 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 VHLP40337 213 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 YAP1P46937 504 aaKnown RBP0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 GDI2P50395 445 aaKnown RBP0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 PRRX1P54821 245 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 BPIFB3P59826 476 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 NUTF2P61970 127 aaKnown RBP0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 RBX1P62877 108 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 ELP6Q0PNE2 266 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 GINS1Q14691 196 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 MESDQ14696 234 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 ZNF77Q15935 545 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 SNRNP35Q16560 246 aaKnown RBP0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 PDK4Q16654 411 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 ZSCAN26Q16670 478 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 KLHL38Q2WGJ6 581 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 NADK2Q4G0N4 442 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 RNASE13Q5GAN3 156 aaKnown RBP0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 TEX43Q6ZNM6 134 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 ABHD13Q7L211 337 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 SLC16A13Q7RTY0 426 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 HDDC2Q7Z4H3 204 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 EGFL6Q8IUX8 553 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 CDKL3Q8IVW4 592 aaPredicted RBP0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 ZNF664Q8N3J9 261 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 LRRC52Q8N7C0 313 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 TMEM105Q8N8V8 129 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 GMCL1P1Q8NEA9 526 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 OR10J6PQ8NGY7 276 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 COQ8AQ8NI60 647 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 LKAAEAR1Q8TD35 194 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 SCFD1Q8WVM8 642 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 FLYWCH2Q96CP2 140 aaKnown RBP0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 COQ2Q96H96 371 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 ZNF488Q96MN9 340 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 NPY6RQ99463 290 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 CCT7Q99832 543 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 SULT4A1Q9BR01 284 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 TRIM62Q9BVG3 475 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 PPA2Q9H2U2 334 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 NIPAL2Q9H841 368 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 MRPL47Q9HD33 250 aaKnown RBP0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 KLHL28Q9NXS3 571 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 HOOK1Q9UJC3 728 aaKnown RBP0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 AURKCQ9UQB9 309 aa0.57□□□□□ -2.32
R3HDM1-214ENST00000480793 MYO9BQ13459 2157 aa0.56□□□□□ -2.32
R3HDM1-214ENST00000480793 ADGRL1O94910 1474 aa0.56□□□□□ -2.32
R3HDM1-214ENST00000480793 IGLV1-36A0A0B4J1U3 117 aa0.56□□□□□ -2.32
R3HDM1-214ENST00000480793 FAM47DPA6NHR8 397 aa0.56□□□□□ -2.32
R3HDM1-214ENST00000480793 MGRN1O60291 552 aa0.56□□□□□ -2.32
R3HDM1-214ENST00000480793 EIF3GO75821 320 aaKnown RBP eCLIP0.56□□□□□ -2.32
R3HDM1-214ENST00000480793 SLC25A14O95258 325 aaPredicted RBP0.56□□□□□ -2.32
R3HDM1-214ENST00000480793 AIFM1O95831 613 aa0.56□□□□□ -2.32
R3HDM1-214ENST00000480793 IGLV3-25P01717 112 aa0.56□□□□□ -2.32
R3HDM1-214ENST00000480793 IL4P05112 153 aa0.56□□□□□ -2.32
R3HDM1-214ENST00000480793 OR8U9P0C7N5 309 aa0.56□□□□□ -2.32
R3HDM1-214ENST00000480793 UBTFL6P0CB48 400 aaPredicted RBP0.56□□□□□ -2.32
R3HDM1-214ENST00000480793 RPA2P15927 270 aa0.56□□□□□ -2.32
R3HDM1-214ENST00000480793 AK4P27144 223 aaPredicted RBP0.56□□□□□ -2.32
R3HDM1-214ENST00000480793 RORAP35398 523 aa0.56□□□□□ -2.32
R3HDM1-214ENST00000480793 ATP5C1P36542 298 aaKnown RBP0.56□□□□□ -2.32
R3HDM1-214ENST00000480793 TGFBR1P36897 503 aa0.56□□□□□ -2.32
R3HDM1-214ENST00000480793 CCT3P49368 545 aaKnown RBP0.56□□□□□ -2.32
R3HDM1-214ENST00000480793 ARG2P78540 354 aa0.56□□□□□ -2.32
R3HDM1-214ENST00000480793 BAMBIQ13145 260 aa0.56□□□□□ -2.32
R3HDM1-214ENST00000480793 RABL6Q3YEC7 729 aaPredicted RBP0.56□□□□□ -2.32
R3HDM1-214ENST00000480793 TMEM225Q6GV28 225 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms